Gene : Araha.1128s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR34971:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN Z Genomic Order:  1
Name:  ? Araha.1128s0001 Secondary Identifier:  ? PAC:28848511

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1128s0001 0.5kb upstream 0.5kb upstream 299 true Scaffold1128: 1-299 Arabidopsis halleri
Araha.1128s0001 0.5kb upstream 0.5kb upstream 92 false Scaffold1128: 1-92 Arabidopsis halleri
Araha.1128s0001 0.5kb downstream 0.5kb downstream 707 true Scaffold1128: 93-799 Arabidopsis halleri
Araha.1128s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1128: 300-799 Arabidopsis halleri
Araha.1128s0001 1.0kb upstream 1.0kb upstream 299 true Scaffold1128: 1-299 Arabidopsis halleri
Araha.1128s0001 1.0kb upstream 1.0kb upstream 92 false Scaffold1128: 1-92 Arabidopsis halleri
Araha.1128s0001 1.0kb downstream 1.0kb downstream 1207 true Scaffold1128: 93-1299 Arabidopsis halleri
Araha.1128s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1128: 300-1299 Arabidopsis halleri
Araha.1128s0001 2.0kb upstream 2.0kb upstream 299 true Scaffold1128: 1-299 Arabidopsis halleri
Araha.1128s0001 2.0kb upstream 2.0kb upstream 92 false Scaffold1128: 1-92 Arabidopsis halleri
Araha.1128s0001 2.0kb downstream 2.0kb downstream 2207 true Scaffold1128: 93-2299 Arabidopsis halleri
Araha.1128s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1128: 300-2299 Arabidopsis halleri
Araha.1128s0001 5.0kb upstream 5.0kb upstream 299 true Scaffold1128: 1-299 Arabidopsis halleri
Araha.1128s0001 5.0kb upstream 5.0kb upstream 92 false Scaffold1128: 1-92 Arabidopsis halleri
Araha.1128s0001 5.0kb downstream 5.0kb downstream 5207 true Scaffold1128: 93-5299 Arabidopsis halleri
Araha.1128s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1128: 300-5299 Arabidopsis halleri
Araha.1128s0001 10.0kb upstream 10.0kb upstream 299 true Scaffold1128: 1-299 Arabidopsis halleri
Araha.1128s0001 10.0kb upstream 10.0kb upstream 92 false Scaffold1128: 1-92 Arabidopsis halleri
Araha.1128s0001 10.0kb downstream 10.0kb downstream 8333 true Scaffold1128: 93-8425 Arabidopsis halleri
Araha.1128s0001 10.0kb downstream 10.0kb downstream 8126 false Scaffold1128: 300-8425 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028507 5273 Angiosperm View MSA
122327674 5261 Brassicaceae View MSA
123837172 5264 Brassicales-Malvales View MSA
124322255 5266 SBM View MSA
124245286 5268 Malvidae View MSA
124050197 5270 Rosid View MSA
123752030 5271 Pentapetalae View MSA
122774318 5272 Eudicot View MSA
121349923 5274 Embryophyte View MSA
123381503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain