Gene : Araha.1670s0004 A. halleri v1.1

Defline:  (1 of 6) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  4
Name:  ? Araha.1670s0004 Secondary Identifier:  ? PAC:28850755

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1670s0004 0.5kb upstream 0.5kb upstream 2795 true Scaffold1670: 12011-14805 Arabidopsis halleri
Araha.1670s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1670: 14306-14805 Arabidopsis halleri
Araha.1670s0004 0.5kb downstream 0.5kb downstream 2795 true Scaffold1670: 11511-14305 Arabidopsis halleri
Araha.1670s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1670: 11511-12010 Arabidopsis halleri
Araha.1670s0004 1.0kb upstream 1.0kb upstream 3295 true Scaffold1670: 12011-15305 Arabidopsis halleri
Araha.1670s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1670: 14306-15305 Arabidopsis halleri
Araha.1670s0004 1.0kb downstream 1.0kb downstream 3295 true Scaffold1670: 11011-14305 Arabidopsis halleri
Araha.1670s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1670: 11011-12010 Arabidopsis halleri
Araha.1670s0004 2.0kb upstream 2.0kb upstream 4295 true Scaffold1670: 12011-16305 Arabidopsis halleri
Araha.1670s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1670: 14306-16305 Arabidopsis halleri
Araha.1670s0004 2.0kb downstream 2.0kb downstream 4295 true Scaffold1670: 10011-14305 Arabidopsis halleri
Araha.1670s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1670: 10011-12010 Arabidopsis halleri
Araha.1670s0004 5.0kb upstream 5.0kb upstream 4653 true Scaffold1670: 12011-16663 Arabidopsis halleri
Araha.1670s0004 5.0kb upstream 5.0kb upstream 2358 false Scaffold1670: 14306-16663 Arabidopsis halleri
Araha.1670s0004 5.0kb downstream 5.0kb downstream 7295 true Scaffold1670: 7011-14305 Arabidopsis halleri
Araha.1670s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1670: 7011-12010 Arabidopsis halleri
Araha.1670s0004 10.0kb upstream 10.0kb upstream 4653 true Scaffold1670: 12011-16663 Arabidopsis halleri
Araha.1670s0004 10.0kb upstream 10.0kb upstream 2358 false Scaffold1670: 14306-16663 Arabidopsis halleri
Araha.1670s0004 10.0kb downstream 10.0kb downstream 12295 true Scaffold1670: 2011-14305 Arabidopsis halleri
Araha.1670s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1670: 2011-12010 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363451 5261 Brassicaceae View MSA
123834565 5264 Brassicales-Malvales View MSA
124343488 5266 SBM View MSA
124248985 5268 Malvidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain