Gene : Araha.1682s0002 A. halleri v1.1

Defline:  (1 of 4) PTHR11780 - NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 Genomic Order:  2
Name:  ? Araha.1682s0002 Secondary Identifier:  ? PAC:28846982

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3781 Arabidopsis halleri pathologic  
Ahalleri PWY-4302 Arabidopsis halleri pathologic  
Ahalleri PWY-5083 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1682s0002 0.5kb upstream 0.5kb upstream 3040 true Scaffold1682: 5638-8677 Arabidopsis halleri
Araha.1682s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1682: 8178-8677 Arabidopsis halleri
Araha.1682s0002 0.5kb downstream 0.5kb downstream 3040 true Scaffold1682: 5138-8177 Arabidopsis halleri
Araha.1682s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1682: 5138-5637 Arabidopsis halleri
Araha.1682s0002 1.0kb upstream 1.0kb upstream 3540 true Scaffold1682: 5638-9177 Arabidopsis halleri
Araha.1682s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1682: 8178-9177 Arabidopsis halleri
Araha.1682s0002 1.0kb downstream 1.0kb downstream 3540 true Scaffold1682: 4638-8177 Arabidopsis halleri
Araha.1682s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1682: 4638-5637 Arabidopsis halleri
Araha.1682s0002 2.0kb upstream 2.0kb upstream 4540 true Scaffold1682: 5638-10177 Arabidopsis halleri
Araha.1682s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1682: 8178-10177 Arabidopsis halleri
Araha.1682s0002 2.0kb downstream 2.0kb downstream 4540 true Scaffold1682: 3638-8177 Arabidopsis halleri
Araha.1682s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1682: 3638-5637 Arabidopsis halleri
Araha.1682s0002 5.0kb upstream 5.0kb upstream 7540 true Scaffold1682: 5638-13177 Arabidopsis halleri
Araha.1682s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1682: 8178-13177 Arabidopsis halleri
Araha.1682s0002 5.0kb downstream 5.0kb downstream 7540 true Scaffold1682: 638-8177 Arabidopsis halleri
Araha.1682s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1682: 638-5637 Arabidopsis halleri
Araha.1682s0002 10.0kb upstream 10.0kb upstream 12540 true Scaffold1682: 5638-18177 Arabidopsis halleri
Araha.1682s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1682: 8178-18177 Arabidopsis halleri
Araha.1682s0002 10.0kb downstream 10.0kb downstream 8177 true Scaffold1682: 1-8177 Arabidopsis halleri
Araha.1682s0002 10.0kb downstream 10.0kb downstream 5637 false Scaffold1682: 1-5637 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374556 5261 Brassicaceae View MSA
123833710 5264 Brassicales-Malvales View MSA
124340714 5266 SBM View MSA
124237168 5268 Malvidae View MSA
124064570 5270 Rosid View MSA
123748716 5271 Pentapetalae View MSA
122786089 5272 Eudicot View MSA
122048540 5273 Angiosperm View MSA
121346586 5274 Embryophyte View MSA
123424028 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain