Gene : Araha.1713s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR11206:SF79 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  3
Name:  ? Araha.1713s0003 Secondary Identifier:  ? PAC:28858894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1713s0003 0.5kb upstream 0.5kb upstream 9361 true Scaffold1713: 4280-13640 Arabidopsis halleri
Araha.1713s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1713: 4280-4779 Arabidopsis halleri
Araha.1713s0003 0.5kb downstream 0.5kb downstream 8945 true Scaffold1713: 4780-13724 Arabidopsis halleri
Araha.1713s0003 0.5kb downstream 0.5kb downstream 84 false Scaffold1713: 13641-13724 Arabidopsis halleri
Araha.1713s0003 1.0kb upstream 1.0kb upstream 9861 true Scaffold1713: 3780-13640 Arabidopsis halleri
Araha.1713s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1713: 3780-4779 Arabidopsis halleri
Araha.1713s0003 1.0kb downstream 1.0kb downstream 8945 true Scaffold1713: 4780-13724 Arabidopsis halleri
Araha.1713s0003 1.0kb downstream 1.0kb downstream 84 false Scaffold1713: 13641-13724 Arabidopsis halleri
Araha.1713s0003 2.0kb upstream 2.0kb upstream 10861 true Scaffold1713: 2780-13640 Arabidopsis halleri
Araha.1713s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1713: 2780-4779 Arabidopsis halleri
Araha.1713s0003 2.0kb downstream 2.0kb downstream 8945 true Scaffold1713: 4780-13724 Arabidopsis halleri
Araha.1713s0003 2.0kb downstream 2.0kb downstream 84 false Scaffold1713: 13641-13724 Arabidopsis halleri
Araha.1713s0003 5.0kb upstream 5.0kb upstream 13640 true Scaffold1713: 1-13640 Arabidopsis halleri
Araha.1713s0003 5.0kb upstream 5.0kb upstream 4779 false Scaffold1713: 1-4779 Arabidopsis halleri
Araha.1713s0003 5.0kb downstream 5.0kb downstream 8945 true Scaffold1713: 4780-13724 Arabidopsis halleri
Araha.1713s0003 5.0kb downstream 5.0kb downstream 84 false Scaffold1713: 13641-13724 Arabidopsis halleri
Araha.1713s0003 10.0kb upstream 10.0kb upstream 13640 true Scaffold1713: 1-13640 Arabidopsis halleri
Araha.1713s0003 10.0kb upstream 10.0kb upstream 4779 false Scaffold1713: 1-4779 Arabidopsis halleri
Araha.1713s0003 10.0kb downstream 10.0kb downstream 8945 true Scaffold1713: 4780-13724 Arabidopsis halleri
Araha.1713s0003 10.0kb downstream 10.0kb downstream 84 false Scaffold1713: 13641-13724 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366585 5261 Brassicaceae View MSA
123836545 5264 Brassicales-Malvales View MSA
124345472 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain