Gene : Araha.1578s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR11649//PTHR11649:SF60 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  1
Name:  ? Araha.1578s0001 Secondary Identifier:  ? PAC:28845382

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1578s0001 0.5kb upstream 0.5kb upstream 4900 true Scaffold1578: 8587-13486 Arabidopsis halleri
Araha.1578s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1578: 8587-9086 Arabidopsis halleri
Araha.1578s0001 0.5kb downstream 0.5kb downstream 4900 true Scaffold1578: 9087-13986 Arabidopsis halleri
Araha.1578s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1578: 13487-13986 Arabidopsis halleri
Araha.1578s0001 1.0kb upstream 1.0kb upstream 5400 true Scaffold1578: 8087-13486 Arabidopsis halleri
Araha.1578s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1578: 8087-9086 Arabidopsis halleri
Araha.1578s0001 1.0kb downstream 1.0kb downstream 5400 true Scaffold1578: 9087-14486 Arabidopsis halleri
Araha.1578s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1578: 13487-14486 Arabidopsis halleri
Araha.1578s0001 2.0kb upstream 2.0kb upstream 6400 true Scaffold1578: 7087-13486 Arabidopsis halleri
Araha.1578s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1578: 7087-9086 Arabidopsis halleri
Araha.1578s0001 2.0kb downstream 2.0kb downstream 6400 true Scaffold1578: 9087-15486 Arabidopsis halleri
Araha.1578s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1578: 13487-15486 Arabidopsis halleri
Araha.1578s0001 5.0kb upstream 5.0kb upstream 9400 true Scaffold1578: 4087-13486 Arabidopsis halleri
Araha.1578s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1578: 4087-9086 Arabidopsis halleri
Araha.1578s0001 5.0kb downstream 5.0kb downstream 9400 true Scaffold1578: 9087-18486 Arabidopsis halleri
Araha.1578s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1578: 13487-18486 Arabidopsis halleri
Araha.1578s0001 10.0kb upstream 10.0kb upstream 13486 true Scaffold1578: 1-13486 Arabidopsis halleri
Araha.1578s0001 10.0kb upstream 10.0kb upstream 9086 false Scaffold1578: 1-9086 Arabidopsis halleri
Araha.1578s0001 10.0kb downstream 10.0kb downstream 14400 true Scaffold1578: 9087-23486 Arabidopsis halleri
Araha.1578s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1578: 13487-23486 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368542 5261 Brassicaceae View MSA
123830642 5264 Brassicales-Malvales View MSA
124350628 5266 SBM View MSA
124243586 5268 Malvidae View MSA
124068964 5270 Rosid View MSA
123747725 5271 Pentapetalae View MSA
122788660 5272 Eudicot View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain