Gene : Araha.1578s0018 A. halleri v1.1
Defline:  (1 of 19) PTHR11802:SF29 - SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED Genomic Order:  18
Name:  ? Araha.1578s0018 Secondary Identifier:  ? PAC:28845377
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3301 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1578s0018 0.5kb upstream 0.5kb upstream 7621 true Scaffold1578: 56171-63791 Arabidopsis halleri
Araha.1578s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1578: 63292-63791 Arabidopsis halleri
Araha.1578s0018 0.5kb downstream 0.5kb downstream 7621 true Scaffold1578: 55671-63291 Arabidopsis halleri
Araha.1578s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1578: 55671-56170 Arabidopsis halleri
Araha.1578s0018 1.0kb upstream 1.0kb upstream 8121 true Scaffold1578: 56171-64291 Arabidopsis halleri
Araha.1578s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1578: 63292-64291 Arabidopsis halleri
Araha.1578s0018 1.0kb downstream 1.0kb downstream 8121 true Scaffold1578: 55171-63291 Arabidopsis halleri
Araha.1578s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1578: 55171-56170 Arabidopsis halleri
Araha.1578s0018 2.0kb upstream 2.0kb upstream 9121 true Scaffold1578: 56171-65291 Arabidopsis halleri
Araha.1578s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1578: 63292-65291 Arabidopsis halleri
Araha.1578s0018 2.0kb downstream 2.0kb downstream 9121 true Scaffold1578: 54171-63291 Arabidopsis halleri
Araha.1578s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1578: 54171-56170 Arabidopsis halleri
Araha.1578s0018 5.0kb upstream 5.0kb upstream 12121 true Scaffold1578: 56171-68291 Arabidopsis halleri
Araha.1578s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1578: 63292-68291 Arabidopsis halleri
Araha.1578s0018 5.0kb downstream 5.0kb downstream 12121 true Scaffold1578: 51171-63291 Arabidopsis halleri
Araha.1578s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1578: 51171-56170 Arabidopsis halleri
Araha.1578s0018 10.0kb upstream 10.0kb upstream 17121 true Scaffold1578: 56171-73291 Arabidopsis halleri
Araha.1578s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1578: 63292-73291 Arabidopsis halleri
Araha.1578s0018 10.0kb downstream 10.0kb downstream 17121 true Scaffold1578: 46171-63291 Arabidopsis halleri
Araha.1578s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1578: 46171-56170 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366826 5261 Brassicaceae View MSA
123799251 5264 Brassicales-Malvales View MSA
124296796 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain