Gene : Araha.1584s0004 A. halleri v1.1
Defline:  (1 of 1) 5.3.99.9 - Neoxanthin synthase / NSY Genomic Order:  4
Name:  ? Araha.1584s0004 Secondary Identifier:  ? PAC:28863498
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6809 Arabidopsis halleri pathologic  
Ahalleri PWY-695 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1584s0004 0.5kb upstream 0.5kb upstream 2183 true Scaffold1584: 29587-31769 Arabidopsis halleri
Araha.1584s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1584: 29587-30086 Arabidopsis halleri
Araha.1584s0004 0.5kb downstream 0.5kb downstream 2183 true Scaffold1584: 30087-32269 Arabidopsis halleri
Araha.1584s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1584: 31770-32269 Arabidopsis halleri
Araha.1584s0004 1.0kb upstream 1.0kb upstream 2683 true Scaffold1584: 29087-31769 Arabidopsis halleri
Araha.1584s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1584: 29087-30086 Arabidopsis halleri
Araha.1584s0004 1.0kb downstream 1.0kb downstream 2683 true Scaffold1584: 30087-32769 Arabidopsis halleri
Araha.1584s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1584: 31770-32769 Arabidopsis halleri
Araha.1584s0004 2.0kb upstream 2.0kb upstream 3683 true Scaffold1584: 28087-31769 Arabidopsis halleri
Araha.1584s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1584: 28087-30086 Arabidopsis halleri
Araha.1584s0004 2.0kb downstream 2.0kb downstream 3683 true Scaffold1584: 30087-33769 Arabidopsis halleri
Araha.1584s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1584: 31770-33769 Arabidopsis halleri
Araha.1584s0004 5.0kb upstream 5.0kb upstream 6683 true Scaffold1584: 25087-31769 Arabidopsis halleri
Araha.1584s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1584: 25087-30086 Arabidopsis halleri
Araha.1584s0004 5.0kb downstream 5.0kb downstream 6683 true Scaffold1584: 30087-36769 Arabidopsis halleri
Araha.1584s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1584: 31770-36769 Arabidopsis halleri
Araha.1584s0004 10.0kb upstream 10.0kb upstream 11683 true Scaffold1584: 20087-31769 Arabidopsis halleri
Araha.1584s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1584: 20087-30086 Arabidopsis halleri
Araha.1584s0004 10.0kb downstream 10.0kb downstream 11683 true Scaffold1584: 30087-41769 Arabidopsis halleri
Araha.1584s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1584: 31770-41769 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362178 5261 Brassicaceae View MSA
123832925 5264 Brassicales-Malvales View MSA
124339377 5266 SBM View MSA
124248470 5268 Malvidae View MSA
124062178 5270 Rosid View MSA
123748588 5271 Pentapetalae View MSA
122790006 5272 Eudicot View MSA
122047205 5273 Angiosperm View MSA
121346000 5274 Embryophyte View MSA
123425892 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain