Gene : Araha.1584s0005 A. halleri v1.1
Defline:  (1 of 2) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  5
Name:  ? Araha.1584s0005 Secondary Identifier:  ? PAC:28863499
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri MANNCAT-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3881 Arabidopsis halleri pathologic  
Ahalleri PWY-5659 Arabidopsis halleri pathologic  
Ahalleri PWY-882 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1584s0005 0.5kb upstream 0.5kb upstream 2989 true Scaffold1584: 34452-37440 Arabidopsis halleri
Araha.1584s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1584: 36941-37440 Arabidopsis halleri
Araha.1584s0005 0.5kb downstream 0.5kb downstream 2989 true Scaffold1584: 33952-36940 Arabidopsis halleri
Araha.1584s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1584: 33952-34451 Arabidopsis halleri
Araha.1584s0005 1.0kb upstream 1.0kb upstream 3489 true Scaffold1584: 34452-37940 Arabidopsis halleri
Araha.1584s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1584: 36941-37940 Arabidopsis halleri
Araha.1584s0005 1.0kb downstream 1.0kb downstream 3489 true Scaffold1584: 33452-36940 Arabidopsis halleri
Araha.1584s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1584: 33452-34451 Arabidopsis halleri
Araha.1584s0005 2.0kb upstream 2.0kb upstream 4489 true Scaffold1584: 34452-38940 Arabidopsis halleri
Araha.1584s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1584: 36941-38940 Arabidopsis halleri
Araha.1584s0005 2.0kb downstream 2.0kb downstream 4489 true Scaffold1584: 32452-36940 Arabidopsis halleri
Araha.1584s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1584: 32452-34451 Arabidopsis halleri
Araha.1584s0005 5.0kb upstream 5.0kb upstream 7489 true Scaffold1584: 34452-41940 Arabidopsis halleri
Araha.1584s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1584: 36941-41940 Arabidopsis halleri
Araha.1584s0005 5.0kb downstream 5.0kb downstream 7489 true Scaffold1584: 29452-36940 Arabidopsis halleri
Araha.1584s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1584: 29452-34451 Arabidopsis halleri
Araha.1584s0005 10.0kb upstream 10.0kb upstream 12489 true Scaffold1584: 34452-46940 Arabidopsis halleri
Araha.1584s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1584: 36941-46940 Arabidopsis halleri
Araha.1584s0005 10.0kb downstream 10.0kb downstream 12489 true Scaffold1584: 24452-36940 Arabidopsis halleri
Araha.1584s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1584: 24452-34451 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365977 5261 Brassicaceae View MSA
123837185 5264 Brassicales-Malvales View MSA
124340778 5266 SBM View MSA
124247259 5268 Malvidae View MSA
124062698 5270 Rosid View MSA
123747047 5271 Pentapetalae View MSA
122796882 5272 Eudicot View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain