Gene : Araha.1584s0003 A. halleri v1.1
Defline:  (1 of 3) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  3
Name:  ? Araha.1584s0003 Secondary Identifier:  ? PAC:28863500
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CALVIN-PWY Arabidopsis halleri pathologic  
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-5723 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1584s0003 0.5kb upstream 0.5kb upstream 1460 true Scaffold1584: 26521-27980 Arabidopsis halleri
Araha.1584s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1584: 26521-27020 Arabidopsis halleri
Araha.1584s0003 0.5kb downstream 0.5kb downstream 1460 true Scaffold1584: 27021-28480 Arabidopsis halleri
Araha.1584s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1584: 27981-28480 Arabidopsis halleri
Araha.1584s0003 1.0kb upstream 1.0kb upstream 1960 true Scaffold1584: 26021-27980 Arabidopsis halleri
Araha.1584s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1584: 26021-27020 Arabidopsis halleri
Araha.1584s0003 1.0kb downstream 1.0kb downstream 1960 true Scaffold1584: 27021-28980 Arabidopsis halleri
Araha.1584s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1584: 27981-28980 Arabidopsis halleri
Araha.1584s0003 2.0kb upstream 2.0kb upstream 2960 true Scaffold1584: 25021-27980 Arabidopsis halleri
Araha.1584s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1584: 25021-27020 Arabidopsis halleri
Araha.1584s0003 2.0kb downstream 2.0kb downstream 2960 true Scaffold1584: 27021-29980 Arabidopsis halleri
Araha.1584s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1584: 27981-29980 Arabidopsis halleri
Araha.1584s0003 5.0kb upstream 5.0kb upstream 5960 true Scaffold1584: 22021-27980 Arabidopsis halleri
Araha.1584s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1584: 22021-27020 Arabidopsis halleri
Araha.1584s0003 5.0kb downstream 5.0kb downstream 5960 true Scaffold1584: 27021-32980 Arabidopsis halleri
Araha.1584s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1584: 27981-32980 Arabidopsis halleri
Araha.1584s0003 10.0kb upstream 10.0kb upstream 10960 true Scaffold1584: 17021-27980 Arabidopsis halleri
Araha.1584s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1584: 17021-27020 Arabidopsis halleri
Araha.1584s0003 10.0kb downstream 10.0kb downstream 10960 true Scaffold1584: 27021-37980 Arabidopsis halleri
Araha.1584s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1584: 27981-37980 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain