Gene : Araha.1523s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR22939:SF76 - PROTEASE DO-LIKE 5, CHLOROPLASTIC Genomic Order:  3
Name:  ? Araha.1523s0003 Secondary Identifier:  ? PAC:28861884

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1523s0003 0.5kb upstream 0.5kb upstream 2268 true Scaffold1523: 7545-9812 Arabidopsis halleri
Araha.1523s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1523: 7545-8044 Arabidopsis halleri
Araha.1523s0003 0.5kb downstream 0.5kb downstream 2268 true Scaffold1523: 8045-10312 Arabidopsis halleri
Araha.1523s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1523: 9813-10312 Arabidopsis halleri
Araha.1523s0003 1.0kb upstream 1.0kb upstream 2768 true Scaffold1523: 7045-9812 Arabidopsis halleri
Araha.1523s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1523: 7045-8044 Arabidopsis halleri
Araha.1523s0003 1.0kb downstream 1.0kb downstream 2768 true Scaffold1523: 8045-10812 Arabidopsis halleri
Araha.1523s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1523: 9813-10812 Arabidopsis halleri
Araha.1523s0003 2.0kb upstream 2.0kb upstream 3768 true Scaffold1523: 6045-9812 Arabidopsis halleri
Araha.1523s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1523: 6045-8044 Arabidopsis halleri
Araha.1523s0003 2.0kb downstream 2.0kb downstream 3768 true Scaffold1523: 8045-11812 Arabidopsis halleri
Araha.1523s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1523: 9813-11812 Arabidopsis halleri
Araha.1523s0003 5.0kb upstream 5.0kb upstream 6768 true Scaffold1523: 3045-9812 Arabidopsis halleri
Araha.1523s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1523: 3045-8044 Arabidopsis halleri
Araha.1523s0003 5.0kb downstream 5.0kb downstream 6768 true Scaffold1523: 8045-14812 Arabidopsis halleri
Araha.1523s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1523: 9813-14812 Arabidopsis halleri
Araha.1523s0003 10.0kb upstream 10.0kb upstream 9812 true Scaffold1523: 1-9812 Arabidopsis halleri
Araha.1523s0003 10.0kb upstream 10.0kb upstream 8044 false Scaffold1523: 1-8044 Arabidopsis halleri
Araha.1523s0003 10.0kb downstream 10.0kb downstream 11768 true Scaffold1523: 8045-19812 Arabidopsis halleri
Araha.1523s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1523: 9813-19812 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372529 5261 Brassicaceae View MSA
123831551 5264 Brassicales-Malvales View MSA
124346322 5266 SBM View MSA
124238394 5268 Malvidae View MSA
124050488 5270 Rosid View MSA
123749873 5271 Pentapetalae View MSA
122788077 5272 Eudicot View MSA
122044835 5273 Angiosperm View MSA
121347205 5274 Embryophyte View MSA
123425899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain