Gene : Araha.1541s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR31614:SF5 - ALLERGEN-LIKE PROTEIN BRSN20-RELATED Genomic Order:  3
Name:  ? Araha.1541s0003 Secondary Identifier:  ? PAC:28838656

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1541s0003 0.5kb upstream 0.5kb upstream 1253 true Scaffold1541: 8619-9871 Arabidopsis halleri
Araha.1541s0003 0.5kb upstream 0.5kb upstream 260 false Scaffold1541: 9612-9871 Arabidopsis halleri
Araha.1541s0003 0.5kb downstream 0.5kb downstream 1493 true Scaffold1541: 8119-9611 Arabidopsis halleri
Araha.1541s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1541: 8119-8618 Arabidopsis halleri
Araha.1541s0003 1.0kb upstream 1.0kb upstream 1253 true Scaffold1541: 8619-9871 Arabidopsis halleri
Araha.1541s0003 1.0kb upstream 1.0kb upstream 260 false Scaffold1541: 9612-9871 Arabidopsis halleri
Araha.1541s0003 1.0kb downstream 1.0kb downstream 1993 true Scaffold1541: 7619-9611 Arabidopsis halleri
Araha.1541s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1541: 7619-8618 Arabidopsis halleri
Araha.1541s0003 2.0kb upstream 2.0kb upstream 1253 true Scaffold1541: 8619-9871 Arabidopsis halleri
Araha.1541s0003 2.0kb upstream 2.0kb upstream 260 false Scaffold1541: 9612-9871 Arabidopsis halleri
Araha.1541s0003 2.0kb downstream 2.0kb downstream 2993 true Scaffold1541: 6619-9611 Arabidopsis halleri
Araha.1541s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1541: 6619-8618 Arabidopsis halleri
Araha.1541s0003 5.0kb upstream 5.0kb upstream 1253 true Scaffold1541: 8619-9871 Arabidopsis halleri
Araha.1541s0003 5.0kb upstream 5.0kb upstream 260 false Scaffold1541: 9612-9871 Arabidopsis halleri
Araha.1541s0003 5.0kb downstream 5.0kb downstream 5993 true Scaffold1541: 3619-9611 Arabidopsis halleri
Araha.1541s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1541: 3619-8618 Arabidopsis halleri
Araha.1541s0003 10.0kb upstream 10.0kb upstream 1253 true Scaffold1541: 8619-9871 Arabidopsis halleri
Araha.1541s0003 10.0kb upstream 10.0kb upstream 260 false Scaffold1541: 9612-9871 Arabidopsis halleri
Araha.1541s0003 10.0kb downstream 10.0kb downstream 9611 true Scaffold1541: 1-9611 Arabidopsis halleri
Araha.1541s0003 10.0kb downstream 10.0kb downstream 8618 false Scaffold1541: 1-8618 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362141 5261 Brassicaceae View MSA
123837904 5264 Brassicales-Malvales View MSA
124336938 5266 SBM View MSA
124243301 5268 Malvidae View MSA
124073821 5270 Rosid View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain