Gene : Araha.1554s0002 A. halleri v1.1
Defline:  (1 of 8) PTHR11685:SF135 - E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Genomic Order:  2
Name:  ? Araha.1554s0002 Secondary Identifier:  ? PAC:28837489
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1554s0002 0.5kb upstream 0.5kb upstream 5655 true Scaffold1554: 16609-22263 Arabidopsis halleri
Araha.1554s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1554: 16609-17108 Arabidopsis halleri
Araha.1554s0002 0.5kb downstream 0.5kb downstream 5297 true Scaffold1554: 17109-22405 Arabidopsis halleri
Araha.1554s0002 0.5kb downstream 0.5kb downstream 142 false Scaffold1554: 22264-22405 Arabidopsis halleri
Araha.1554s0002 1.0kb upstream 1.0kb upstream 6155 true Scaffold1554: 16109-22263 Arabidopsis halleri
Araha.1554s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1554: 16109-17108 Arabidopsis halleri
Araha.1554s0002 1.0kb downstream 1.0kb downstream 5297 true Scaffold1554: 17109-22405 Arabidopsis halleri
Araha.1554s0002 1.0kb downstream 1.0kb downstream 142 false Scaffold1554: 22264-22405 Arabidopsis halleri
Araha.1554s0002 2.0kb upstream 2.0kb upstream 7155 true Scaffold1554: 15109-22263 Arabidopsis halleri
Araha.1554s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1554: 15109-17108 Arabidopsis halleri
Araha.1554s0002 2.0kb downstream 2.0kb downstream 5297 true Scaffold1554: 17109-22405 Arabidopsis halleri
Araha.1554s0002 2.0kb downstream 2.0kb downstream 142 false Scaffold1554: 22264-22405 Arabidopsis halleri
Araha.1554s0002 5.0kb upstream 5.0kb upstream 10155 true Scaffold1554: 12109-22263 Arabidopsis halleri
Araha.1554s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1554: 12109-17108 Arabidopsis halleri
Araha.1554s0002 5.0kb downstream 5.0kb downstream 5297 true Scaffold1554: 17109-22405 Arabidopsis halleri
Araha.1554s0002 5.0kb downstream 5.0kb downstream 142 false Scaffold1554: 22264-22405 Arabidopsis halleri
Araha.1554s0002 10.0kb upstream 10.0kb upstream 15155 true Scaffold1554: 7109-22263 Arabidopsis halleri
Araha.1554s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1554: 7109-17108 Arabidopsis halleri
Araha.1554s0002 10.0kb downstream 10.0kb downstream 5297 true Scaffold1554: 17109-22405 Arabidopsis halleri
Araha.1554s0002 10.0kb downstream 10.0kb downstream 142 false Scaffold1554: 22264-22405 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365268 5261 Brassicaceae View MSA
123831076 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain