Gene : Araha.1918s0005 A. halleri v1.1
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  5
Name:  ? Araha.1918s0005 Secondary Identifier:  ? PAC:28845504
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1269 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1918s0005 0.5kb upstream 0.5kb upstream 3201 true Scaffold1918: 14161-17361 Arabidopsis halleri
Araha.1918s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1918: 14161-14660 Arabidopsis halleri
Araha.1918s0005 0.5kb downstream 0.5kb downstream 3201 true Scaffold1918: 14661-17861 Arabidopsis halleri
Araha.1918s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1918: 17362-17861 Arabidopsis halleri
Araha.1918s0005 1.0kb upstream 1.0kb upstream 3701 true Scaffold1918: 13661-17361 Arabidopsis halleri
Araha.1918s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1918: 13661-14660 Arabidopsis halleri
Araha.1918s0005 1.0kb downstream 1.0kb downstream 3701 true Scaffold1918: 14661-18361 Arabidopsis halleri
Araha.1918s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1918: 17362-18361 Arabidopsis halleri
Araha.1918s0005 2.0kb upstream 2.0kb upstream 4701 true Scaffold1918: 12661-17361 Arabidopsis halleri
Araha.1918s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1918: 12661-14660 Arabidopsis halleri
Araha.1918s0005 2.0kb downstream 2.0kb downstream 4701 true Scaffold1918: 14661-19361 Arabidopsis halleri
Araha.1918s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1918: 17362-19361 Arabidopsis halleri
Araha.1918s0005 5.0kb upstream 5.0kb upstream 7701 true Scaffold1918: 9661-17361 Arabidopsis halleri
Araha.1918s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1918: 9661-14660 Arabidopsis halleri
Araha.1918s0005 5.0kb downstream 5.0kb downstream 7701 true Scaffold1918: 14661-22361 Arabidopsis halleri
Araha.1918s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1918: 17362-22361 Arabidopsis halleri
Araha.1918s0005 10.0kb upstream 10.0kb upstream 12701 true Scaffold1918: 4661-17361 Arabidopsis halleri
Araha.1918s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1918: 4661-14660 Arabidopsis halleri
Araha.1918s0005 10.0kb downstream 10.0kb downstream 12701 true Scaffold1918: 14661-27361 Arabidopsis halleri
Araha.1918s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1918: 17362-27361 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379396 5261 Brassicaceae View MSA
123829711 5264 Brassicales-Malvales View MSA
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain