Gene : Araha.1887s0006 A. halleri v1.1

Defline:  (1 of 1) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  6
Name:  ? Araha.1887s0006 Secondary Identifier:  ? PAC:28839104

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1887s0006 0.5kb upstream 0.5kb upstream 4633 true Scaffold1887: 26040-30672 Arabidopsis halleri
Araha.1887s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1887: 26040-26539 Arabidopsis halleri
Araha.1887s0006 0.5kb downstream 0.5kb downstream 4633 true Scaffold1887: 26540-31172 Arabidopsis halleri
Araha.1887s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1887: 30673-31172 Arabidopsis halleri
Araha.1887s0006 1.0kb upstream 1.0kb upstream 5133 true Scaffold1887: 25540-30672 Arabidopsis halleri
Araha.1887s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1887: 25540-26539 Arabidopsis halleri
Araha.1887s0006 1.0kb downstream 1.0kb downstream 5133 true Scaffold1887: 26540-31672 Arabidopsis halleri
Araha.1887s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1887: 30673-31672 Arabidopsis halleri
Araha.1887s0006 2.0kb upstream 2.0kb upstream 6133 true Scaffold1887: 24540-30672 Arabidopsis halleri
Araha.1887s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1887: 24540-26539 Arabidopsis halleri
Araha.1887s0006 2.0kb downstream 2.0kb downstream 6133 true Scaffold1887: 26540-32672 Arabidopsis halleri
Araha.1887s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1887: 30673-32672 Arabidopsis halleri
Araha.1887s0006 5.0kb upstream 5.0kb upstream 9133 true Scaffold1887: 21540-30672 Arabidopsis halleri
Araha.1887s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1887: 21540-26539 Arabidopsis halleri
Araha.1887s0006 5.0kb downstream 5.0kb downstream 9133 true Scaffold1887: 26540-35672 Arabidopsis halleri
Araha.1887s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1887: 30673-35672 Arabidopsis halleri
Araha.1887s0006 10.0kb upstream 10.0kb upstream 14133 true Scaffold1887: 16540-30672 Arabidopsis halleri
Araha.1887s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1887: 16540-26539 Arabidopsis halleri
Araha.1887s0006 10.0kb downstream 10.0kb downstream 14133 true Scaffold1887: 26540-40672 Arabidopsis halleri
Araha.1887s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1887: 30673-40672 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363959 5261 Brassicaceae View MSA
123841536 5264 Brassicales-Malvales View MSA
124341484 5266 SBM View MSA
124240074 5268 Malvidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain