Gene : Araha.1742s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR24326:SF294 - HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-RELATED Genomic Order:  3
Name:  ? Araha.1742s0003 Secondary Identifier:  ? PAC:28858910

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1742s0003 0.5kb upstream 0.5kb upstream 6422 true Scaffold1742: 7887-14308 Arabidopsis halleri
Araha.1742s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 13809-14308 Arabidopsis halleri
Araha.1742s0003 0.5kb downstream 0.5kb downstream 6422 true Scaffold1742: 7387-13808 Arabidopsis halleri
Araha.1742s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 7387-7886 Arabidopsis halleri
Araha.1742s0003 1.0kb upstream 1.0kb upstream 6922 true Scaffold1742: 7887-14808 Arabidopsis halleri
Araha.1742s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 13809-14808 Arabidopsis halleri
Araha.1742s0003 1.0kb downstream 1.0kb downstream 6922 true Scaffold1742: 6887-13808 Arabidopsis halleri
Araha.1742s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 6887-7886 Arabidopsis halleri
Araha.1742s0003 2.0kb upstream 2.0kb upstream 7922 true Scaffold1742: 7887-15808 Arabidopsis halleri
Araha.1742s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 13809-15808 Arabidopsis halleri
Araha.1742s0003 2.0kb downstream 2.0kb downstream 7922 true Scaffold1742: 5887-13808 Arabidopsis halleri
Araha.1742s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 5887-7886 Arabidopsis halleri
Araha.1742s0003 5.0kb upstream 5.0kb upstream 10922 true Scaffold1742: 7887-18808 Arabidopsis halleri
Araha.1742s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 13809-18808 Arabidopsis halleri
Araha.1742s0003 5.0kb downstream 5.0kb downstream 10922 true Scaffold1742: 2887-13808 Arabidopsis halleri
Araha.1742s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 2887-7886 Arabidopsis halleri
Araha.1742s0003 10.0kb upstream 10.0kb upstream 15922 true Scaffold1742: 7887-23808 Arabidopsis halleri
Araha.1742s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 13809-23808 Arabidopsis halleri
Araha.1742s0003 10.0kb downstream 10.0kb downstream 13808 true Scaffold1742: 1-13808 Arabidopsis halleri
Araha.1742s0003 10.0kb downstream 10.0kb downstream 7886 false Scaffold1742: 1-7886 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373715 5261 Brassicaceae View MSA
123838055 5264 Brassicales-Malvales View MSA
124338505 5266 SBM View MSA
124240663 5268 Malvidae View MSA
124067525 5270 Rosid View MSA
123744207 5271 Pentapetalae View MSA
122795649 5272 Eudicot View MSA
122043712 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain