Gene : Araha.1742s0005 A. halleri v1.1
Defline:  (1 of 2) PF00004//PF02933//PF07724 - ATPase family associated with various cellular activities (AAA) (AAA) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // AAA domain (Cdc48 subfamily) (AAA_2) Genomic Order:  5
Name:  ? Araha.1742s0005 Secondary Identifier:  ? PAC:28858903
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1742s0005 0.5kb upstream 0.5kb upstream 6693 true Scaffold1742: 21065-27757 Arabidopsis halleri
Araha.1742s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 27258-27757 Arabidopsis halleri
Araha.1742s0005 0.5kb downstream 0.5kb downstream 6693 true Scaffold1742: 20565-27257 Arabidopsis halleri
Araha.1742s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 20565-21064 Arabidopsis halleri
Araha.1742s0005 1.0kb upstream 1.0kb upstream 7193 true Scaffold1742: 21065-28257 Arabidopsis halleri
Araha.1742s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 27258-28257 Arabidopsis halleri
Araha.1742s0005 1.0kb downstream 1.0kb downstream 7193 true Scaffold1742: 20065-27257 Arabidopsis halleri
Araha.1742s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 20065-21064 Arabidopsis halleri
Araha.1742s0005 2.0kb upstream 2.0kb upstream 8193 true Scaffold1742: 21065-29257 Arabidopsis halleri
Araha.1742s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 27258-29257 Arabidopsis halleri
Araha.1742s0005 2.0kb downstream 2.0kb downstream 8193 true Scaffold1742: 19065-27257 Arabidopsis halleri
Araha.1742s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 19065-21064 Arabidopsis halleri
Araha.1742s0005 5.0kb upstream 5.0kb upstream 11193 true Scaffold1742: 21065-32257 Arabidopsis halleri
Araha.1742s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 27258-32257 Arabidopsis halleri
Araha.1742s0005 5.0kb downstream 5.0kb downstream 11193 true Scaffold1742: 16065-27257 Arabidopsis halleri
Araha.1742s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 16065-21064 Arabidopsis halleri
Araha.1742s0005 10.0kb upstream 10.0kb upstream 16193 true Scaffold1742: 21065-37257 Arabidopsis halleri
Araha.1742s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 27258-37257 Arabidopsis halleri
Araha.1742s0005 10.0kb downstream 10.0kb downstream 16193 true Scaffold1742: 11065-27257 Arabidopsis halleri
Araha.1742s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 11065-21064 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364563 5261 Brassicaceae View MSA
123839839 5264 Brassicales-Malvales View MSA
124343422 5266 SBM View MSA
124238930 5268 Malvidae View MSA
124065880 5270 Rosid View MSA
123748878 5271 Pentapetalae View MSA
122787277 5272 Eudicot View MSA
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain