Gene : Araha.2123s0003 A. halleri v1.1

Defline:  (1 of 5) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  3
Name:  ? Araha.2123s0003 Secondary Identifier:  ? PAC:28858742

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2123s0003 0.5kb upstream 0.5kb upstream 3914 true Scaffold2123: 7460-11373 Arabidopsis halleri
Araha.2123s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2123: 10874-11373 Arabidopsis halleri
Araha.2123s0003 0.5kb downstream 0.5kb downstream 3914 true Scaffold2123: 6960-10873 Arabidopsis halleri
Araha.2123s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2123: 6960-7459 Arabidopsis halleri
Araha.2123s0003 1.0kb upstream 1.0kb upstream 4414 true Scaffold2123: 7460-11873 Arabidopsis halleri
Araha.2123s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2123: 10874-11873 Arabidopsis halleri
Araha.2123s0003 1.0kb downstream 1.0kb downstream 4414 true Scaffold2123: 6460-10873 Arabidopsis halleri
Araha.2123s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2123: 6460-7459 Arabidopsis halleri
Araha.2123s0003 2.0kb upstream 2.0kb upstream 5414 true Scaffold2123: 7460-12873 Arabidopsis halleri
Araha.2123s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2123: 10874-12873 Arabidopsis halleri
Araha.2123s0003 2.0kb downstream 2.0kb downstream 5414 true Scaffold2123: 5460-10873 Arabidopsis halleri
Araha.2123s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2123: 5460-7459 Arabidopsis halleri
Araha.2123s0003 5.0kb upstream 5.0kb upstream 6686 true Scaffold2123: 7460-14145 Arabidopsis halleri
Araha.2123s0003 5.0kb upstream 5.0kb upstream 3272 false Scaffold2123: 10874-14145 Arabidopsis halleri
Araha.2123s0003 5.0kb downstream 5.0kb downstream 8414 true Scaffold2123: 2460-10873 Arabidopsis halleri
Araha.2123s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2123: 2460-7459 Arabidopsis halleri
Araha.2123s0003 10.0kb upstream 10.0kb upstream 6686 true Scaffold2123: 7460-14145 Arabidopsis halleri
Araha.2123s0003 10.0kb upstream 10.0kb upstream 3272 false Scaffold2123: 10874-14145 Arabidopsis halleri
Araha.2123s0003 10.0kb downstream 10.0kb downstream 10873 true Scaffold2123: 1-10873 Arabidopsis halleri
Araha.2123s0003 10.0kb downstream 10.0kb downstream 7459 false Scaffold2123: 1-7459 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373947 5261 Brassicaceae View MSA
123835905 5264 Brassicales-Malvales View MSA
124337966 5266 SBM View MSA
124243321 5268 Malvidae View MSA
124065696 5270 Rosid View MSA
123744612 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain