Gene : Araha.2000s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR11941:SF61 - PROTEIN ECH-5 Genomic Order:  1
Name:  ? Araha.2000s0001 Secondary Identifier:  ? PAC:28836637
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LEU-DEG2-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2000s0001 0.5kb upstream 0.5kb upstream 2154 true Scaffold2000: 183-2336 Arabidopsis halleri
Araha.2000s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2000: 1837-2336 Arabidopsis halleri
Araha.2000s0001 0.5kb downstream 0.5kb downstream 1836 true Scaffold2000: 1-1836 Arabidopsis halleri
Araha.2000s0001 0.5kb downstream 0.5kb downstream 182 false Scaffold2000: 1-182 Arabidopsis halleri
Araha.2000s0001 1.0kb upstream 1.0kb upstream 2654 true Scaffold2000: 183-2836 Arabidopsis halleri
Araha.2000s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2000: 1837-2836 Arabidopsis halleri
Araha.2000s0001 1.0kb downstream 1.0kb downstream 1836 true Scaffold2000: 1-1836 Arabidopsis halleri
Araha.2000s0001 1.0kb downstream 1.0kb downstream 182 false Scaffold2000: 1-182 Arabidopsis halleri
Araha.2000s0001 2.0kb upstream 2.0kb upstream 3654 true Scaffold2000: 183-3836 Arabidopsis halleri
Araha.2000s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2000: 1837-3836 Arabidopsis halleri
Araha.2000s0001 2.0kb downstream 2.0kb downstream 1836 true Scaffold2000: 1-1836 Arabidopsis halleri
Araha.2000s0001 2.0kb downstream 2.0kb downstream 182 false Scaffold2000: 1-182 Arabidopsis halleri
Araha.2000s0001 5.0kb upstream 5.0kb upstream 6654 true Scaffold2000: 183-6836 Arabidopsis halleri
Araha.2000s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2000: 1837-6836 Arabidopsis halleri
Araha.2000s0001 5.0kb downstream 5.0kb downstream 1836 true Scaffold2000: 1-1836 Arabidopsis halleri
Araha.2000s0001 5.0kb downstream 5.0kb downstream 182 false Scaffold2000: 1-182 Arabidopsis halleri
Araha.2000s0001 10.0kb upstream 10.0kb upstream 9800 true Scaffold2000: 183-9982 Arabidopsis halleri
Araha.2000s0001 10.0kb upstream 10.0kb upstream 8146 false Scaffold2000: 1837-9982 Arabidopsis halleri
Araha.2000s0001 10.0kb downstream 10.0kb downstream 1836 true Scaffold2000: 1-1836 Arabidopsis halleri
Araha.2000s0001 10.0kb downstream 10.0kb downstream 182 false Scaffold2000: 1-182 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365847 5261 Brassicaceae View MSA
123834998 5264 Brassicales-Malvales View MSA
124321989 5266 SBM View MSA
124240745 5268 Malvidae View MSA
124069005 5270 Rosid View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain