Gene : Araha.2050s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR19384:SF54 - FERREDOXIN--NADP REDUCTASE, ROOT ISOZYME 1, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Araha.2050s0002 Secondary Identifier:  ? PAC:28844132
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PHOTOALL-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-101 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2050s0002 0.5kb upstream 0.5kb upstream 2500 true Scaffold2050: 913-3412 Arabidopsis halleri
Araha.2050s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2050: 913-1412 Arabidopsis halleri
Araha.2050s0002 0.5kb downstream 0.5kb downstream 2500 true Scaffold2050: 1413-3912 Arabidopsis halleri
Araha.2050s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2050: 3413-3912 Arabidopsis halleri
Araha.2050s0002 1.0kb upstream 1.0kb upstream 3000 true Scaffold2050: 413-3412 Arabidopsis halleri
Araha.2050s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2050: 413-1412 Arabidopsis halleri
Araha.2050s0002 1.0kb downstream 1.0kb downstream 3000 true Scaffold2050: 1413-4412 Arabidopsis halleri
Araha.2050s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2050: 3413-4412 Arabidopsis halleri
Araha.2050s0002 2.0kb upstream 2.0kb upstream 3412 true Scaffold2050: 1-3412 Arabidopsis halleri
Araha.2050s0002 2.0kb upstream 2.0kb upstream 1412 false Scaffold2050: 1-1412 Arabidopsis halleri
Araha.2050s0002 2.0kb downstream 2.0kb downstream 4000 true Scaffold2050: 1413-5412 Arabidopsis halleri
Araha.2050s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2050: 3413-5412 Arabidopsis halleri
Araha.2050s0002 5.0kb upstream 5.0kb upstream 3412 true Scaffold2050: 1-3412 Arabidopsis halleri
Araha.2050s0002 5.0kb upstream 5.0kb upstream 1412 false Scaffold2050: 1-1412 Arabidopsis halleri
Araha.2050s0002 5.0kb downstream 5.0kb downstream 7000 true Scaffold2050: 1413-8412 Arabidopsis halleri
Araha.2050s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2050: 3413-8412 Arabidopsis halleri
Araha.2050s0002 10.0kb upstream 10.0kb upstream 3412 true Scaffold2050: 1-3412 Arabidopsis halleri
Araha.2050s0002 10.0kb upstream 10.0kb upstream 1412 false Scaffold2050: 1-1412 Arabidopsis halleri
Araha.2050s0002 10.0kb downstream 10.0kb downstream 12000 true Scaffold2050: 1413-13412 Arabidopsis halleri
Araha.2050s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold2050: 3413-13412 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337411 5266 SBM View MSA
122363969 5261 Brassicaceae View MSA
123837439 5264 Brassicales-Malvales View MSA
124248953 5268 Malvidae View MSA
124064755 5270 Rosid View MSA
123736625 5271 Pentapetalae View MSA
122790491 5272 Eudicot View MSA
122045006 5273 Angiosperm View MSA
121347443 5274 Embryophyte View MSA
123424825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain