Gene : Araha.2050s0007 A. halleri v1.1

Defline:  (1 of 3) PTHR22814:SF134 - COPPER-BINDING FAMILY PROTEIN-RELATED Genomic Order:  7
Name:  ? Araha.2050s0007 Secondary Identifier:  ? PAC:28844141

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2050s0007 0.5kb upstream 0.5kb upstream 1394 true Scaffold2050: 22743-24136 Arabidopsis halleri
Araha.2050s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2050: 23637-24136 Arabidopsis halleri
Araha.2050s0007 0.5kb downstream 0.5kb downstream 1394 true Scaffold2050: 22243-23636 Arabidopsis halleri
Araha.2050s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2050: 22243-22742 Arabidopsis halleri
Araha.2050s0007 1.0kb upstream 1.0kb upstream 1894 true Scaffold2050: 22743-24636 Arabidopsis halleri
Araha.2050s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2050: 23637-24636 Arabidopsis halleri
Araha.2050s0007 1.0kb downstream 1.0kb downstream 1894 true Scaffold2050: 21743-23636 Arabidopsis halleri
Araha.2050s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2050: 21743-22742 Arabidopsis halleri
Araha.2050s0007 2.0kb upstream 2.0kb upstream 2894 true Scaffold2050: 22743-25636 Arabidopsis halleri
Araha.2050s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2050: 23637-25636 Arabidopsis halleri
Araha.2050s0007 2.0kb downstream 2.0kb downstream 2894 true Scaffold2050: 20743-23636 Arabidopsis halleri
Araha.2050s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2050: 20743-22742 Arabidopsis halleri
Araha.2050s0007 5.0kb upstream 5.0kb upstream 5894 true Scaffold2050: 22743-28636 Arabidopsis halleri
Araha.2050s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2050: 23637-28636 Arabidopsis halleri
Araha.2050s0007 5.0kb downstream 5.0kb downstream 5894 true Scaffold2050: 17743-23636 Arabidopsis halleri
Araha.2050s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2050: 17743-22742 Arabidopsis halleri
Araha.2050s0007 10.0kb upstream 10.0kb upstream 10894 true Scaffold2050: 22743-33636 Arabidopsis halleri
Araha.2050s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2050: 23637-33636 Arabidopsis halleri
Araha.2050s0007 10.0kb downstream 10.0kb downstream 10894 true Scaffold2050: 12743-23636 Arabidopsis halleri
Araha.2050s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2050: 12743-22742 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381183 5261 Brassicaceae View MSA
123837290 5264 Brassicales-Malvales View MSA
124343921 5266 SBM View MSA
124249975 5268 Malvidae View MSA
124070484 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain