Gene : Araha.1949s0001 A. halleri v1.1

Defline:  (1 of 6) PF11331 - Probable zinc-ribbon domain (zinc_ribbon_12) Genomic Order:  1
Name:  ? Araha.1949s0001 Secondary Identifier:  ? PAC:28855725

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1949s0001 0.5kb upstream 0.5kb upstream 5682 true Scaffold1949: 4200-9881 Arabidopsis halleri
Araha.1949s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1949: 9382-9881 Arabidopsis halleri
Araha.1949s0001 0.5kb downstream 0.5kb downstream 5682 true Scaffold1949: 3700-9381 Arabidopsis halleri
Araha.1949s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1949: 3700-4199 Arabidopsis halleri
Araha.1949s0001 1.0kb upstream 1.0kb upstream 6182 true Scaffold1949: 4200-10381 Arabidopsis halleri
Araha.1949s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1949: 9382-10381 Arabidopsis halleri
Araha.1949s0001 1.0kb downstream 1.0kb downstream 6182 true Scaffold1949: 3200-9381 Arabidopsis halleri
Araha.1949s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1949: 3200-4199 Arabidopsis halleri
Araha.1949s0001 2.0kb upstream 2.0kb upstream 7182 true Scaffold1949: 4200-11381 Arabidopsis halleri
Araha.1949s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1949: 9382-11381 Arabidopsis halleri
Araha.1949s0001 2.0kb downstream 2.0kb downstream 7182 true Scaffold1949: 2200-9381 Arabidopsis halleri
Araha.1949s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1949: 2200-4199 Arabidopsis halleri
Araha.1949s0001 5.0kb upstream 5.0kb upstream 10182 true Scaffold1949: 4200-14381 Arabidopsis halleri
Araha.1949s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1949: 9382-14381 Arabidopsis halleri
Araha.1949s0001 5.0kb downstream 5.0kb downstream 9381 true Scaffold1949: 1-9381 Arabidopsis halleri
Araha.1949s0001 5.0kb downstream 5.0kb downstream 4199 false Scaffold1949: 1-4199 Arabidopsis halleri
Araha.1949s0001 10.0kb upstream 10.0kb upstream 15182 true Scaffold1949: 4200-19381 Arabidopsis halleri
Araha.1949s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1949: 9382-19381 Arabidopsis halleri
Araha.1949s0001 10.0kb downstream 10.0kb downstream 9381 true Scaffold1949: 1-9381 Arabidopsis halleri
Araha.1949s0001 10.0kb downstream 10.0kb downstream 4199 false Scaffold1949: 1-4199 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511240 5273 Angiosperm View MSA
122374187 5261 Brassicaceae View MSA
123800700 5264 Brassicales-Malvales View MSA
124298080 5266 SBM View MSA
124149815 5268 Malvidae View MSA
123875548 5270 Rosid View MSA
123459349 5271 Pentapetalae View MSA
122494740 5272 Eudicot View MSA
120784297 5274 Embryophyte View MSA
122826225 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain