Gene : Araha.1975s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR12176:SF16 - PROTEIN C17E4.11 Genomic Order:  1
Name:  ? Araha.1975s0001 Secondary Identifier:  ? PAC:28845016

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.1975s0001 0.5kb upstream 0.5kb upstream 2534 true Scaffold1975: 34-2567 Arabidopsis halleri
Araha.1975s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1975: 34-533 Arabidopsis halleri
Araha.1975s0001 0.5kb downstream 0.5kb downstream 2534 true Scaffold1975: 534-3067 Arabidopsis halleri
Araha.1975s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1975: 2568-3067 Arabidopsis halleri
Araha.1975s0001 1.0kb upstream 1.0kb upstream 2567 true Scaffold1975: 1-2567 Arabidopsis halleri
Araha.1975s0001 1.0kb upstream 1.0kb upstream 533 false Scaffold1975: 1-533 Arabidopsis halleri
Araha.1975s0001 1.0kb downstream 1.0kb downstream 3034 true Scaffold1975: 534-3567 Arabidopsis halleri
Araha.1975s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1975: 2568-3567 Arabidopsis halleri
Araha.1975s0001 2.0kb upstream 2.0kb upstream 2567 true Scaffold1975: 1-2567 Arabidopsis halleri
Araha.1975s0001 2.0kb upstream 2.0kb upstream 533 false Scaffold1975: 1-533 Arabidopsis halleri
Araha.1975s0001 2.0kb downstream 2.0kb downstream 4034 true Scaffold1975: 534-4567 Arabidopsis halleri
Araha.1975s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1975: 2568-4567 Arabidopsis halleri
Araha.1975s0001 5.0kb upstream 5.0kb upstream 2567 true Scaffold1975: 1-2567 Arabidopsis halleri
Araha.1975s0001 5.0kb upstream 5.0kb upstream 533 false Scaffold1975: 1-533 Arabidopsis halleri
Araha.1975s0001 5.0kb downstream 5.0kb downstream 7034 true Scaffold1975: 534-7567 Arabidopsis halleri
Araha.1975s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1975: 2568-7567 Arabidopsis halleri
Araha.1975s0001 10.0kb upstream 10.0kb upstream 2567 true Scaffold1975: 1-2567 Arabidopsis halleri
Araha.1975s0001 10.0kb upstream 10.0kb upstream 533 false Scaffold1975: 1-533 Arabidopsis halleri
Araha.1975s0001 10.0kb downstream 10.0kb downstream 12034 true Scaffold1975: 534-12567 Arabidopsis halleri
Araha.1975s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1975: 2568-12567 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373311 5261 Brassicaceae View MSA
123828499 5264 Brassicales-Malvales View MSA
124337964 5266 SBM View MSA
124237969 5268 Malvidae View MSA
124067500 5270 Rosid View MSA
123737258 5271 Pentapetalae View MSA
122789962 5272 Eudicot View MSA
122046876 5273 Angiosperm View MSA
121344450 5274 Embryophyte View MSA
123426760 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain