Gene : Araha.2258s0015 A. halleri v1.1

Defline:  (1 of 1) 6.3.3.1 - Phosphoribosylformylglycinamidine cyclo-ligase / Phosphoribosylaminoimidazole synthetase Genomic Order:  15
Name:  ? Araha.2258s0015 Secondary Identifier:  ? PAC:28844259

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6121 Arabidopsis halleri pathologic  
Ahalleri PWY-841 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2258s0015 0.5kb upstream 0.5kb upstream 2592 true Scaffold2258: 60331-62922 Arabidopsis halleri
Araha.2258s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2258: 62423-62922 Arabidopsis halleri
Araha.2258s0015 0.5kb downstream 0.5kb downstream 2592 true Scaffold2258: 59831-62422 Arabidopsis halleri
Araha.2258s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2258: 59831-60330 Arabidopsis halleri
Araha.2258s0015 1.0kb upstream 1.0kb upstream 3092 true Scaffold2258: 60331-63422 Arabidopsis halleri
Araha.2258s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2258: 62423-63422 Arabidopsis halleri
Araha.2258s0015 1.0kb downstream 1.0kb downstream 3092 true Scaffold2258: 59331-62422 Arabidopsis halleri
Araha.2258s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2258: 59331-60330 Arabidopsis halleri
Araha.2258s0015 2.0kb upstream 2.0kb upstream 4092 true Scaffold2258: 60331-64422 Arabidopsis halleri
Araha.2258s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2258: 62423-64422 Arabidopsis halleri
Araha.2258s0015 2.0kb downstream 2.0kb downstream 4092 true Scaffold2258: 58331-62422 Arabidopsis halleri
Araha.2258s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2258: 58331-60330 Arabidopsis halleri
Araha.2258s0015 5.0kb upstream 5.0kb upstream 7092 true Scaffold2258: 60331-67422 Arabidopsis halleri
Araha.2258s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold2258: 62423-67422 Arabidopsis halleri
Araha.2258s0015 5.0kb downstream 5.0kb downstream 7092 true Scaffold2258: 55331-62422 Arabidopsis halleri
Araha.2258s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2258: 55331-60330 Arabidopsis halleri
Araha.2258s0015 10.0kb upstream 10.0kb upstream 12092 true Scaffold2258: 60331-72422 Arabidopsis halleri
Araha.2258s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold2258: 62423-72422 Arabidopsis halleri
Araha.2258s0015 10.0kb downstream 10.0kb downstream 12092 true Scaffold2258: 50331-62422 Arabidopsis halleri
Araha.2258s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2258: 50331-60330 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373702 5261 Brassicaceae View MSA
123830491 5264 Brassicales-Malvales View MSA
124321676 5266 SBM View MSA
124238750 5268 Malvidae View MSA
124061752 5270 Rosid View MSA
123745564 5271 Pentapetalae View MSA
122789177 5272 Eudicot View MSA
122043371 5273 Angiosperm View MSA
121346228 5274 Embryophyte View MSA
123428592 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain