Gene : Araha.2389s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  3
Name:  ? Araha.2389s0003 Secondary Identifier:  ? PAC:28839716

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2389s0003 0.5kb upstream 0.5kb upstream 2622 true Scaffold2389: 6972-9593 Arabidopsis halleri
Araha.2389s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2389: 9094-9593 Arabidopsis halleri
Araha.2389s0003 0.5kb downstream 0.5kb downstream 2622 true Scaffold2389: 6472-9093 Arabidopsis halleri
Araha.2389s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2389: 6472-6971 Arabidopsis halleri
Araha.2389s0003 1.0kb upstream 1.0kb upstream 3122 true Scaffold2389: 6972-10093 Arabidopsis halleri
Araha.2389s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2389: 9094-10093 Arabidopsis halleri
Araha.2389s0003 1.0kb downstream 1.0kb downstream 3122 true Scaffold2389: 5972-9093 Arabidopsis halleri
Araha.2389s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2389: 5972-6971 Arabidopsis halleri
Araha.2389s0003 2.0kb upstream 2.0kb upstream 4122 true Scaffold2389: 6972-11093 Arabidopsis halleri
Araha.2389s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2389: 9094-11093 Arabidopsis halleri
Araha.2389s0003 2.0kb downstream 2.0kb downstream 4122 true Scaffold2389: 4972-9093 Arabidopsis halleri
Araha.2389s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2389: 4972-6971 Arabidopsis halleri
Araha.2389s0003 5.0kb upstream 5.0kb upstream 7122 true Scaffold2389: 6972-14093 Arabidopsis halleri
Araha.2389s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2389: 9094-14093 Arabidopsis halleri
Araha.2389s0003 5.0kb downstream 5.0kb downstream 7122 true Scaffold2389: 1972-9093 Arabidopsis halleri
Araha.2389s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2389: 1972-6971 Arabidopsis halleri
Araha.2389s0003 10.0kb upstream 10.0kb upstream 12122 true Scaffold2389: 6972-19093 Arabidopsis halleri
Araha.2389s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2389: 9094-19093 Arabidopsis halleri
Araha.2389s0003 10.0kb downstream 10.0kb downstream 9093 true Scaffold2389: 1-9093 Arabidopsis halleri
Araha.2389s0003 10.0kb downstream 10.0kb downstream 6971 false Scaffold2389: 1-6971 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373614 5261 Brassicaceae View MSA
123830760 5264 Brassicales-Malvales View MSA
124337855 5266 SBM View MSA
124243641 5268 Malvidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain