Gene : Araha.2597s0029 A. halleri v1.1

Defline:  (1 of 2) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  29
Name:  ? Araha.2597s0029 Secondary Identifier:  ? PAC:28842316

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2597s0029 0.5kb upstream 0.5kb upstream 2104 true Scaffold2597: 117090-119193 Arabidopsis halleri
Araha.2597s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold2597: 117090-117589 Arabidopsis halleri
Araha.2597s0029 0.5kb downstream 0.5kb downstream 2104 true Scaffold2597: 117590-119693 Arabidopsis halleri
Araha.2597s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold2597: 119194-119693 Arabidopsis halleri
Araha.2597s0029 1.0kb upstream 1.0kb upstream 2604 true Scaffold2597: 116590-119193 Arabidopsis halleri
Araha.2597s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold2597: 116590-117589 Arabidopsis halleri
Araha.2597s0029 1.0kb downstream 1.0kb downstream 2604 true Scaffold2597: 117590-120193 Arabidopsis halleri
Araha.2597s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold2597: 119194-120193 Arabidopsis halleri
Araha.2597s0029 2.0kb upstream 2.0kb upstream 3604 true Scaffold2597: 115590-119193 Arabidopsis halleri
Araha.2597s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold2597: 115590-117589 Arabidopsis halleri
Araha.2597s0029 2.0kb downstream 2.0kb downstream 3604 true Scaffold2597: 117590-121193 Arabidopsis halleri
Araha.2597s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold2597: 119194-121193 Arabidopsis halleri
Araha.2597s0029 5.0kb upstream 5.0kb upstream 6604 true Scaffold2597: 112590-119193 Arabidopsis halleri
Araha.2597s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold2597: 112590-117589 Arabidopsis halleri
Araha.2597s0029 5.0kb downstream 5.0kb downstream 6604 true Scaffold2597: 117590-124193 Arabidopsis halleri
Araha.2597s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold2597: 119194-124193 Arabidopsis halleri
Araha.2597s0029 10.0kb upstream 10.0kb upstream 11604 true Scaffold2597: 107590-119193 Arabidopsis halleri
Araha.2597s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold2597: 107590-117589 Arabidopsis halleri
Araha.2597s0029 10.0kb downstream 10.0kb downstream 6795 true Scaffold2597: 117590-124384 Arabidopsis halleri
Araha.2597s0029 10.0kb downstream 10.0kb downstream 5191 false Scaffold2597: 119194-124384 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365607 5261 Brassicaceae View MSA
123798994 5264 Brassicales-Malvales View MSA
124296563 5266 SBM View MSA
124148676 5268 Malvidae View MSA
123874627 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain