Gene : Araha.2525s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR10357//PTHR10357:SF149 - ALPHA-AMYLASE Genomic Order:  2
Name:  ? Araha.2525s0002 Secondary Identifier:  ? PAC:28852290
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6724 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2525s0002 0.5kb upstream 0.5kb upstream 2600 true Scaffold2525: 6258-8857 Arabidopsis halleri
Araha.2525s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2525: 8358-8857 Arabidopsis halleri
Araha.2525s0002 0.5kb downstream 0.5kb downstream 2600 true Scaffold2525: 5758-8357 Arabidopsis halleri
Araha.2525s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2525: 5758-6257 Arabidopsis halleri
Araha.2525s0002 1.0kb upstream 1.0kb upstream 3100 true Scaffold2525: 6258-9357 Arabidopsis halleri
Araha.2525s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2525: 8358-9357 Arabidopsis halleri
Araha.2525s0002 1.0kb downstream 1.0kb downstream 3100 true Scaffold2525: 5258-8357 Arabidopsis halleri
Araha.2525s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2525: 5258-6257 Arabidopsis halleri
Araha.2525s0002 2.0kb upstream 2.0kb upstream 4100 true Scaffold2525: 6258-10357 Arabidopsis halleri
Araha.2525s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2525: 8358-10357 Arabidopsis halleri
Araha.2525s0002 2.0kb downstream 2.0kb downstream 4100 true Scaffold2525: 4258-8357 Arabidopsis halleri
Araha.2525s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2525: 4258-6257 Arabidopsis halleri
Araha.2525s0002 5.0kb upstream 5.0kb upstream 7100 true Scaffold2525: 6258-13357 Arabidopsis halleri
Araha.2525s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2525: 8358-13357 Arabidopsis halleri
Araha.2525s0002 5.0kb downstream 5.0kb downstream 7100 true Scaffold2525: 1258-8357 Arabidopsis halleri
Araha.2525s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2525: 1258-6257 Arabidopsis halleri
Araha.2525s0002 10.0kb upstream 10.0kb upstream 10313 true Scaffold2525: 6258-16570 Arabidopsis halleri
Araha.2525s0002 10.0kb upstream 10.0kb upstream 8213 false Scaffold2525: 8358-16570 Arabidopsis halleri
Araha.2525s0002 10.0kb downstream 10.0kb downstream 8357 true Scaffold2525: 1-8357 Arabidopsis halleri
Araha.2525s0002 10.0kb downstream 10.0kb downstream 6257 false Scaffold2525: 1-6257 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367257 5261 Brassicaceae View MSA
123834019 5264 Brassicales-Malvales View MSA
124348109 5266 SBM View MSA
124249247 5268 Malvidae View MSA
124066457 5270 Rosid View MSA
123740444 5271 Pentapetalae View MSA
122787837 5272 Eudicot View MSA
122047143 5273 Angiosperm View MSA
123429164 5275 Viridiplantae View MSA
121348122 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain