Gene : Araha.2490s0023 A. halleri v1.1

Defline:  (1 of 3) KOG1762 - 60s acidic ribosomal protein P1 Genomic Order:  23
Name:  ? Araha.2490s0023 Secondary Identifier:  ? PAC:28845301

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2490s0023 0.5kb upstream 0.5kb upstream 1591 true Scaffold2490: 107373-108963 Arabidopsis halleri
Araha.2490s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold2490: 107373-107872 Arabidopsis halleri
Araha.2490s0023 0.5kb downstream 0.5kb downstream 1591 true Scaffold2490: 107873-109463 Arabidopsis halleri
Araha.2490s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold2490: 108964-109463 Arabidopsis halleri
Araha.2490s0023 1.0kb upstream 1.0kb upstream 2091 true Scaffold2490: 106873-108963 Arabidopsis halleri
Araha.2490s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold2490: 106873-107872 Arabidopsis halleri
Araha.2490s0023 1.0kb downstream 1.0kb downstream 2091 true Scaffold2490: 107873-109963 Arabidopsis halleri
Araha.2490s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold2490: 108964-109963 Arabidopsis halleri
Araha.2490s0023 2.0kb upstream 2.0kb upstream 3091 true Scaffold2490: 105873-108963 Arabidopsis halleri
Araha.2490s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold2490: 105873-107872 Arabidopsis halleri
Araha.2490s0023 2.0kb downstream 2.0kb downstream 3091 true Scaffold2490: 107873-110963 Arabidopsis halleri
Araha.2490s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold2490: 108964-110963 Arabidopsis halleri
Araha.2490s0023 5.0kb upstream 5.0kb upstream 6091 true Scaffold2490: 102873-108963 Arabidopsis halleri
Araha.2490s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold2490: 102873-107872 Arabidopsis halleri
Araha.2490s0023 5.0kb downstream 5.0kb downstream 6091 true Scaffold2490: 107873-113963 Arabidopsis halleri
Araha.2490s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold2490: 108964-113963 Arabidopsis halleri
Araha.2490s0023 10.0kb upstream 10.0kb upstream 11091 true Scaffold2490: 97873-108963 Arabidopsis halleri
Araha.2490s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold2490: 97873-107872 Arabidopsis halleri
Araha.2490s0023 10.0kb downstream 10.0kb downstream 11091 true Scaffold2490: 107873-118963 Arabidopsis halleri
Araha.2490s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold2490: 108964-118963 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376707 5261 Brassicaceae View MSA
123840228 5264 Brassicales-Malvales View MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain