Gene : Araha.2756s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR23270//PTHR23270:SF9 - PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5 Genomic Order:  1
Name:  ? Araha.2756s0001 Secondary Identifier:  ? PAC:28842744

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2756s0001 0.5kb upstream 0.5kb upstream 2757 true Scaffold2756: 259-3015 Arabidopsis halleri
Araha.2756s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2756: 2516-3015 Arabidopsis halleri
Araha.2756s0001 0.5kb downstream 0.5kb downstream 2515 true Scaffold2756: 1-2515 Arabidopsis halleri
Araha.2756s0001 0.5kb downstream 0.5kb downstream 258 false Scaffold2756: 1-258 Arabidopsis halleri
Araha.2756s0001 1.0kb upstream 1.0kb upstream 3257 true Scaffold2756: 259-3515 Arabidopsis halleri
Araha.2756s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2756: 2516-3515 Arabidopsis halleri
Araha.2756s0001 1.0kb downstream 1.0kb downstream 2515 true Scaffold2756: 1-2515 Arabidopsis halleri
Araha.2756s0001 1.0kb downstream 1.0kb downstream 258 false Scaffold2756: 1-258 Arabidopsis halleri
Araha.2756s0001 2.0kb upstream 2.0kb upstream 4257 true Scaffold2756: 259-4515 Arabidopsis halleri
Araha.2756s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2756: 2516-4515 Arabidopsis halleri
Araha.2756s0001 2.0kb downstream 2.0kb downstream 2515 true Scaffold2756: 1-2515 Arabidopsis halleri
Araha.2756s0001 2.0kb downstream 2.0kb downstream 258 false Scaffold2756: 1-258 Arabidopsis halleri
Araha.2756s0001 5.0kb upstream 5.0kb upstream 7257 true Scaffold2756: 259-7515 Arabidopsis halleri
Araha.2756s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2756: 2516-7515 Arabidopsis halleri
Araha.2756s0001 5.0kb downstream 5.0kb downstream 2515 true Scaffold2756: 1-2515 Arabidopsis halleri
Araha.2756s0001 5.0kb downstream 5.0kb downstream 258 false Scaffold2756: 1-258 Arabidopsis halleri
Araha.2756s0001 10.0kb upstream 10.0kb upstream 11830 true Scaffold2756: 259-12088 Arabidopsis halleri
Araha.2756s0001 10.0kb upstream 10.0kb upstream 9573 false Scaffold2756: 2516-12088 Arabidopsis halleri
Araha.2756s0001 10.0kb downstream 10.0kb downstream 2515 true Scaffold2756: 1-2515 Arabidopsis halleri
Araha.2756s0001 10.0kb downstream 10.0kb downstream 258 false Scaffold2756: 1-258 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361979 5261 Brassicaceae View MSA
123834907 5264 Brassicales-Malvales View MSA
124339157 5266 SBM View MSA
124237979 5268 Malvidae View MSA
124064090 5270 Rosid View MSA
123737111 5271 Pentapetalae View MSA
122791346 5272 Eudicot View MSA
122043466 5273 Angiosperm View MSA
121344790 5274 Embryophyte View MSA
123423896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain