Gene : Araha.2699s0019 A. halleri v1.1
Defline:  (1 of 2) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  19
Name:  ? Araha.2699s0019 Secondary Identifier:  ? PAC:28854757
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2699s0019 0.5kb upstream 0.5kb upstream 3005 true Scaffold2699: 80028-83032 Arabidopsis halleri
Araha.2699s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold2699: 80028-80527 Arabidopsis halleri
Araha.2699s0019 0.5kb downstream 0.5kb downstream 3005 true Scaffold2699: 80528-83532 Arabidopsis halleri
Araha.2699s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold2699: 83033-83532 Arabidopsis halleri
Araha.2699s0019 1.0kb upstream 1.0kb upstream 3505 true Scaffold2699: 79528-83032 Arabidopsis halleri
Araha.2699s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold2699: 79528-80527 Arabidopsis halleri
Araha.2699s0019 1.0kb downstream 1.0kb downstream 3505 true Scaffold2699: 80528-84032 Arabidopsis halleri
Araha.2699s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold2699: 83033-84032 Arabidopsis halleri
Araha.2699s0019 2.0kb upstream 2.0kb upstream 4505 true Scaffold2699: 78528-83032 Arabidopsis halleri
Araha.2699s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold2699: 78528-80527 Arabidopsis halleri
Araha.2699s0019 2.0kb downstream 2.0kb downstream 4505 true Scaffold2699: 80528-85032 Arabidopsis halleri
Araha.2699s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold2699: 83033-85032 Arabidopsis halleri
Araha.2699s0019 5.0kb upstream 5.0kb upstream 7505 true Scaffold2699: 75528-83032 Arabidopsis halleri
Araha.2699s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold2699: 75528-80527 Arabidopsis halleri
Araha.2699s0019 5.0kb downstream 5.0kb downstream 7505 true Scaffold2699: 80528-88032 Arabidopsis halleri
Araha.2699s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold2699: 83033-88032 Arabidopsis halleri
Araha.2699s0019 10.0kb upstream 10.0kb upstream 12505 true Scaffold2699: 70528-83032 Arabidopsis halleri
Araha.2699s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold2699: 70528-80527 Arabidopsis halleri
Araha.2699s0019 10.0kb downstream 10.0kb downstream 12505 true Scaffold2699: 80528-93032 Arabidopsis halleri
Araha.2699s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold2699: 83033-93032 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379096 5261 Brassicaceae View MSA
123833233 5264 Brassicales-Malvales View MSA
124340826 5266 SBM View MSA
124238864 5268 Malvidae View MSA
124074907 5270 Rosid View MSA
123738384 5271 Pentapetalae View MSA
122793450 5272 Eudicot View MSA
122045874 5273 Angiosperm View MSA
121344249 5274 Embryophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain