Gene : Araha.2637s0022 A. halleri v1.1
Defline:  (1 of 1) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  22
Name:  ? Araha.2637s0022 Secondary Identifier:  ? PAC:28839774
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2637s0022 0.5kb upstream 0.5kb upstream 3151 true Scaffold2637: 78259-81409 Arabidopsis halleri
Araha.2637s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold2637: 78259-78758 Arabidopsis halleri
Araha.2637s0022 0.5kb downstream 0.5kb downstream 3151 true Scaffold2637: 78759-81909 Arabidopsis halleri
Araha.2637s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold2637: 81410-81909 Arabidopsis halleri
Araha.2637s0022 1.0kb upstream 1.0kb upstream 3651 true Scaffold2637: 77759-81409 Arabidopsis halleri
Araha.2637s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold2637: 77759-78758 Arabidopsis halleri
Araha.2637s0022 1.0kb downstream 1.0kb downstream 3651 true Scaffold2637: 78759-82409 Arabidopsis halleri
Araha.2637s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold2637: 81410-82409 Arabidopsis halleri
Araha.2637s0022 2.0kb upstream 2.0kb upstream 4651 true Scaffold2637: 76759-81409 Arabidopsis halleri
Araha.2637s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold2637: 76759-78758 Arabidopsis halleri
Araha.2637s0022 2.0kb downstream 2.0kb downstream 4651 true Scaffold2637: 78759-83409 Arabidopsis halleri
Araha.2637s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold2637: 81410-83409 Arabidopsis halleri
Araha.2637s0022 5.0kb upstream 5.0kb upstream 7651 true Scaffold2637: 73759-81409 Arabidopsis halleri
Araha.2637s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold2637: 73759-78758 Arabidopsis halleri
Araha.2637s0022 5.0kb downstream 5.0kb downstream 5794 true Scaffold2637: 78759-84552 Arabidopsis halleri
Araha.2637s0022 5.0kb downstream 5.0kb downstream 3143 false Scaffold2637: 81410-84552 Arabidopsis halleri
Araha.2637s0022 10.0kb upstream 10.0kb upstream 12651 true Scaffold2637: 68759-81409 Arabidopsis halleri
Araha.2637s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold2637: 68759-78758 Arabidopsis halleri
Araha.2637s0022 10.0kb downstream 10.0kb downstream 5794 true Scaffold2637: 78759-84552 Arabidopsis halleri
Araha.2637s0022 10.0kb downstream 10.0kb downstream 3143 false Scaffold2637: 81410-84552 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122377924 5261 Brassicaceae View MSA
123834214 5264 Brassicales-Malvales View MSA
124340654 5266 SBM View MSA
124239628 5268 Malvidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain