Gene : Araha.2660s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1
Name:  ? Araha.2660s0001 Secondary Identifier:  ? PAC:28847511
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2660s0001 0.5kb upstream 0.5kb upstream 3934 true Scaffold2660: 2974-6907 Arabidopsis halleri
Araha.2660s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2660: 6408-6907 Arabidopsis halleri
Araha.2660s0001 0.5kb downstream 0.5kb downstream 3934 true Scaffold2660: 2474-6407 Arabidopsis halleri
Araha.2660s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2660: 2474-2973 Arabidopsis halleri
Araha.2660s0001 1.0kb upstream 1.0kb upstream 4434 true Scaffold2660: 2974-7407 Arabidopsis halleri
Araha.2660s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2660: 6408-7407 Arabidopsis halleri
Araha.2660s0001 1.0kb downstream 1.0kb downstream 4434 true Scaffold2660: 1974-6407 Arabidopsis halleri
Araha.2660s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2660: 1974-2973 Arabidopsis halleri
Araha.2660s0001 2.0kb upstream 2.0kb upstream 5434 true Scaffold2660: 2974-8407 Arabidopsis halleri
Araha.2660s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2660: 6408-8407 Arabidopsis halleri
Araha.2660s0001 2.0kb downstream 2.0kb downstream 5434 true Scaffold2660: 974-6407 Arabidopsis halleri
Araha.2660s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2660: 974-2973 Arabidopsis halleri
Araha.2660s0001 5.0kb upstream 5.0kb upstream 8434 true Scaffold2660: 2974-11407 Arabidopsis halleri
Araha.2660s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2660: 6408-11407 Arabidopsis halleri
Araha.2660s0001 5.0kb downstream 5.0kb downstream 6407 true Scaffold2660: 1-6407 Arabidopsis halleri
Araha.2660s0001 5.0kb downstream 5.0kb downstream 2973 false Scaffold2660: 1-2973 Arabidopsis halleri
Araha.2660s0001 10.0kb upstream 10.0kb upstream 13434 true Scaffold2660: 2974-16407 Arabidopsis halleri
Araha.2660s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2660: 6408-16407 Arabidopsis halleri
Araha.2660s0001 10.0kb downstream 10.0kb downstream 6407 true Scaffold2660: 1-6407 Arabidopsis halleri
Araha.2660s0001 10.0kb downstream 10.0kb downstream 2973 false Scaffold2660: 1-2973 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372135 5261 Brassicaceae View MSA
123829079 5264 Brassicales-Malvales View MSA
124344336 5266 SBM View MSA
124243678 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain