Gene : Araha.2782s0003 A. halleri v1.1
Defline:  (1 of 1) PTHR11254//PTHR11254:SF329 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  3
Name:  ? Araha.2782s0003 Secondary Identifier:  ? PAC:28854879
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2782s0003 0.5kb upstream 0.5kb upstream 3766 true Scaffold2782: 5421-9186 Arabidopsis halleri
Araha.2782s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2782: 8687-9186 Arabidopsis halleri
Araha.2782s0003 0.5kb downstream 0.5kb downstream 3766 true Scaffold2782: 4921-8686 Arabidopsis halleri
Araha.2782s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2782: 4921-5420 Arabidopsis halleri
Araha.2782s0003 1.0kb upstream 1.0kb upstream 4266 true Scaffold2782: 5421-9686 Arabidopsis halleri
Araha.2782s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2782: 8687-9686 Arabidopsis halleri
Araha.2782s0003 1.0kb downstream 1.0kb downstream 4266 true Scaffold2782: 4421-8686 Arabidopsis halleri
Araha.2782s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2782: 4421-5420 Arabidopsis halleri
Araha.2782s0003 2.0kb upstream 2.0kb upstream 5266 true Scaffold2782: 5421-10686 Arabidopsis halleri
Araha.2782s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2782: 8687-10686 Arabidopsis halleri
Araha.2782s0003 2.0kb downstream 2.0kb downstream 5266 true Scaffold2782: 3421-8686 Arabidopsis halleri
Araha.2782s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2782: 3421-5420 Arabidopsis halleri
Araha.2782s0003 5.0kb upstream 5.0kb upstream 8266 true Scaffold2782: 5421-13686 Arabidopsis halleri
Araha.2782s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2782: 8687-13686 Arabidopsis halleri
Araha.2782s0003 5.0kb downstream 5.0kb downstream 8266 true Scaffold2782: 421-8686 Arabidopsis halleri
Araha.2782s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2782: 421-5420 Arabidopsis halleri
Araha.2782s0003 10.0kb upstream 10.0kb upstream 13266 true Scaffold2782: 5421-18686 Arabidopsis halleri
Araha.2782s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2782: 8687-18686 Arabidopsis halleri
Araha.2782s0003 10.0kb downstream 10.0kb downstream 8686 true Scaffold2782: 1-8686 Arabidopsis halleri
Araha.2782s0003 10.0kb downstream 10.0kb downstream 5420 false Scaffold2782: 1-5420 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374842 5261 Brassicaceae View MSA
123835538 5264 Brassicales-Malvales View MSA
124343855 5266 SBM View MSA
124239492 5268 Malvidae View MSA
124063401 5270 Rosid View MSA
123749847 5271 Pentapetalae View MSA
122786985 5272 Eudicot View MSA
122048097 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121348188 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain