Gene : Araha.2878s0016 A. halleri v1.1

Defline:  (1 of 1) PTHR10410:SF2 - LYS-63-SPECIFIC DEUBIQUITINASE BRCC36 Genomic Order:  16
Name:  ? Araha.2878s0016 Secondary Identifier:  ? PAC:28840271

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2878s0016 0.5kb upstream 0.5kb upstream 3052 true Scaffold2878: 57991-61042 Arabidopsis halleri
Araha.2878s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2878: 60543-61042 Arabidopsis halleri
Araha.2878s0016 0.5kb downstream 0.5kb downstream 3052 true Scaffold2878: 57491-60542 Arabidopsis halleri
Araha.2878s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2878: 57491-57990 Arabidopsis halleri
Araha.2878s0016 1.0kb upstream 1.0kb upstream 3552 true Scaffold2878: 57991-61542 Arabidopsis halleri
Araha.2878s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2878: 60543-61542 Arabidopsis halleri
Araha.2878s0016 1.0kb downstream 1.0kb downstream 3552 true Scaffold2878: 56991-60542 Arabidopsis halleri
Araha.2878s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2878: 56991-57990 Arabidopsis halleri
Araha.2878s0016 2.0kb upstream 2.0kb upstream 4552 true Scaffold2878: 57991-62542 Arabidopsis halleri
Araha.2878s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2878: 60543-62542 Arabidopsis halleri
Araha.2878s0016 2.0kb downstream 2.0kb downstream 4552 true Scaffold2878: 55991-60542 Arabidopsis halleri
Araha.2878s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2878: 55991-57990 Arabidopsis halleri
Araha.2878s0016 5.0kb upstream 5.0kb upstream 7552 true Scaffold2878: 57991-65542 Arabidopsis halleri
Araha.2878s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2878: 60543-65542 Arabidopsis halleri
Araha.2878s0016 5.0kb downstream 5.0kb downstream 7552 true Scaffold2878: 52991-60542 Arabidopsis halleri
Araha.2878s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2878: 52991-57990 Arabidopsis halleri
Araha.2878s0016 10.0kb upstream 10.0kb upstream 12552 true Scaffold2878: 57991-70542 Arabidopsis halleri
Araha.2878s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2878: 60543-70542 Arabidopsis halleri
Araha.2878s0016 10.0kb downstream 10.0kb downstream 12552 true Scaffold2878: 47991-60542 Arabidopsis halleri
Araha.2878s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2878: 47991-57990 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364742 5261 Brassicaceae View MSA
123831674 5264 Brassicales-Malvales View MSA
124339487 5266 SBM View MSA
124248094 5268 Malvidae View MSA
124064840 5270 Rosid View MSA
123741552 5271 Pentapetalae View MSA
122788768 5272 Eudicot View MSA
122043403 5273 Angiosperm View MSA
121344026 5274 Embryophyte View MSA
123428720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain