Gene : Araha.3020s0003 A. halleri v1.1

Defline:  (1 of 26) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED Genomic Order:  3
Name:  ? Araha.3020s0003 Secondary Identifier:  ? PAC:28862671

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3020s0003 0.5kb upstream 0.5kb upstream 2008 true Scaffold3020: 9868-11875 Arabidopsis halleri
Araha.3020s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3020: 11376-11875 Arabidopsis halleri
Araha.3020s0003 0.5kb downstream 0.5kb downstream 2008 true Scaffold3020: 9368-11375 Arabidopsis halleri
Araha.3020s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3020: 9368-9867 Arabidopsis halleri
Araha.3020s0003 1.0kb upstream 1.0kb upstream 2508 true Scaffold3020: 9868-12375 Arabidopsis halleri
Araha.3020s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3020: 11376-12375 Arabidopsis halleri
Araha.3020s0003 1.0kb downstream 1.0kb downstream 2508 true Scaffold3020: 8868-11375 Arabidopsis halleri
Araha.3020s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3020: 8868-9867 Arabidopsis halleri
Araha.3020s0003 2.0kb upstream 2.0kb upstream 3505 true Scaffold3020: 9868-13372 Arabidopsis halleri
Araha.3020s0003 2.0kb upstream 2.0kb upstream 1997 false Scaffold3020: 11376-13372 Arabidopsis halleri
Araha.3020s0003 2.0kb downstream 2.0kb downstream 3508 true Scaffold3020: 7868-11375 Arabidopsis halleri
Araha.3020s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3020: 7868-9867 Arabidopsis halleri
Araha.3020s0003 5.0kb upstream 5.0kb upstream 3505 true Scaffold3020: 9868-13372 Arabidopsis halleri
Araha.3020s0003 5.0kb upstream 5.0kb upstream 1997 false Scaffold3020: 11376-13372 Arabidopsis halleri
Araha.3020s0003 5.0kb downstream 5.0kb downstream 6508 true Scaffold3020: 4868-11375 Arabidopsis halleri
Araha.3020s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3020: 4868-9867 Arabidopsis halleri
Araha.3020s0003 10.0kb upstream 10.0kb upstream 3505 true Scaffold3020: 9868-13372 Arabidopsis halleri
Araha.3020s0003 10.0kb upstream 10.0kb upstream 1997 false Scaffold3020: 11376-13372 Arabidopsis halleri
Araha.3020s0003 10.0kb downstream 10.0kb downstream 11375 true Scaffold3020: 1-11375 Arabidopsis halleri
Araha.3020s0003 10.0kb downstream 10.0kb downstream 9867 false Scaffold3020: 1-9867 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379456 5261 Brassicaceae View MSA
123802278 5264 Brassicales-Malvales View MSA
124299487 5266 SBM View MSA
124250079 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain