Gene : Araha.3034s0021 A. halleri v1.1

Defline:  (1 of 3) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  21
Name:  ? Araha.3034s0021 Secondary Identifier:  ? PAC:28841360

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3561 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3034s0021 0.5kb upstream 0.5kb upstream 4064 true Scaffold3034: 73590-77653 Arabidopsis halleri
Araha.3034s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3034: 77154-77653 Arabidopsis halleri
Araha.3034s0021 0.5kb downstream 0.5kb downstream 4064 true Scaffold3034: 73090-77153 Arabidopsis halleri
Araha.3034s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3034: 73090-73589 Arabidopsis halleri
Araha.3034s0021 1.0kb upstream 1.0kb upstream 4564 true Scaffold3034: 73590-78153 Arabidopsis halleri
Araha.3034s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3034: 77154-78153 Arabidopsis halleri
Araha.3034s0021 1.0kb downstream 1.0kb downstream 4564 true Scaffold3034: 72590-77153 Arabidopsis halleri
Araha.3034s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3034: 72590-73589 Arabidopsis halleri
Araha.3034s0021 2.0kb upstream 2.0kb upstream 5564 true Scaffold3034: 73590-79153 Arabidopsis halleri
Araha.3034s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3034: 77154-79153 Arabidopsis halleri
Araha.3034s0021 2.0kb downstream 2.0kb downstream 5564 true Scaffold3034: 71590-77153 Arabidopsis halleri
Araha.3034s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3034: 71590-73589 Arabidopsis halleri
Araha.3034s0021 5.0kb upstream 5.0kb upstream 8564 true Scaffold3034: 73590-82153 Arabidopsis halleri
Araha.3034s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3034: 77154-82153 Arabidopsis halleri
Araha.3034s0021 5.0kb downstream 5.0kb downstream 8564 true Scaffold3034: 68590-77153 Arabidopsis halleri
Araha.3034s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3034: 68590-73589 Arabidopsis halleri
Araha.3034s0021 10.0kb upstream 10.0kb upstream 13564 true Scaffold3034: 73590-87153 Arabidopsis halleri
Araha.3034s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3034: 77154-87153 Arabidopsis halleri
Araha.3034s0021 10.0kb downstream 10.0kb downstream 13564 true Scaffold3034: 63590-77153 Arabidopsis halleri
Araha.3034s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3034: 63590-73589 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366175 5261 Brassicaceae View MSA
123835397 5264 Brassicales-Malvales View MSA
124341482 5266 SBM View MSA
124251763 5268 Malvidae View MSA
124060691 5270 Rosid View MSA
123737706 5271 Pentapetalae View MSA
122793552 5272 Eudicot View MSA
122046081 5273 Angiosperm View MSA
121348211 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain