Gene : Araha.2965s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR35708:SF1 - GB Genomic Order:  1
Name:  ? Araha.2965s0001 Secondary Identifier:  ? PAC:28837888

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2965s0001 0.5kb upstream 0.5kb upstream 1088 true Scaffold2965: 73-1160 Arabidopsis halleri
Araha.2965s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2965: 73-572 Arabidopsis halleri
Araha.2965s0001 0.5kb downstream 0.5kb downstream 1088 true Scaffold2965: 573-1660 Arabidopsis halleri
Araha.2965s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2965: 1161-1660 Arabidopsis halleri
Araha.2965s0001 1.0kb upstream 1.0kb upstream 1160 true Scaffold2965: 1-1160 Arabidopsis halleri
Araha.2965s0001 1.0kb upstream 1.0kb upstream 572 false Scaffold2965: 1-572 Arabidopsis halleri
Araha.2965s0001 1.0kb downstream 1.0kb downstream 1588 true Scaffold2965: 573-2160 Arabidopsis halleri
Araha.2965s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2965: 1161-2160 Arabidopsis halleri
Araha.2965s0001 2.0kb upstream 2.0kb upstream 1160 true Scaffold2965: 1-1160 Arabidopsis halleri
Araha.2965s0001 2.0kb upstream 2.0kb upstream 572 false Scaffold2965: 1-572 Arabidopsis halleri
Araha.2965s0001 2.0kb downstream 2.0kb downstream 2588 true Scaffold2965: 573-3160 Arabidopsis halleri
Araha.2965s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2965: 1161-3160 Arabidopsis halleri
Araha.2965s0001 5.0kb upstream 5.0kb upstream 1160 true Scaffold2965: 1-1160 Arabidopsis halleri
Araha.2965s0001 5.0kb upstream 5.0kb upstream 572 false Scaffold2965: 1-572 Arabidopsis halleri
Araha.2965s0001 5.0kb downstream 5.0kb downstream 5588 true Scaffold2965: 573-6160 Arabidopsis halleri
Araha.2965s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2965: 1161-6160 Arabidopsis halleri
Araha.2965s0001 10.0kb upstream 10.0kb upstream 1160 true Scaffold2965: 1-1160 Arabidopsis halleri
Araha.2965s0001 10.0kb upstream 10.0kb upstream 572 false Scaffold2965: 1-572 Arabidopsis halleri
Araha.2965s0001 10.0kb downstream 10.0kb downstream 10588 true Scaffold2965: 573-11160 Arabidopsis halleri
Araha.2965s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2965: 1161-11160 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366667 5261 Brassicaceae View MSA
123799223 5264 Brassicales-Malvales View MSA
124296769 5266 SBM View MSA
124252320 5268 Malvidae View MSA
124070540 5270 Rosid View MSA
123748172 5271 Pentapetalae View MSA
122794330 5272 Eudicot View MSA
122044423 5273 Angiosperm View MSA
121310293 5274 Embryophyte View MSA
123347819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain