Gene : Araha.2977s0003 A. halleri v1.1

Defline:  (1 of 3) PTHR31448:SF9 - F14D16.14 Genomic Order:  3
Name:  ? Araha.2977s0003 Secondary Identifier:  ? PAC:28859654

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2977s0003 0.5kb upstream 0.5kb upstream 2168 true Scaffold2977: 8479-10646 Arabidopsis halleri
Araha.2977s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2977: 8479-8978 Arabidopsis halleri
Araha.2977s0003 0.5kb downstream 0.5kb downstream 2168 true Scaffold2977: 8979-11146 Arabidopsis halleri
Araha.2977s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2977: 10647-11146 Arabidopsis halleri
Araha.2977s0003 1.0kb upstream 1.0kb upstream 2668 true Scaffold2977: 7979-10646 Arabidopsis halleri
Araha.2977s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2977: 7979-8978 Arabidopsis halleri
Araha.2977s0003 1.0kb downstream 1.0kb downstream 2668 true Scaffold2977: 8979-11646 Arabidopsis halleri
Araha.2977s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2977: 10647-11646 Arabidopsis halleri
Araha.2977s0003 2.0kb upstream 2.0kb upstream 3668 true Scaffold2977: 6979-10646 Arabidopsis halleri
Araha.2977s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2977: 6979-8978 Arabidopsis halleri
Araha.2977s0003 2.0kb downstream 2.0kb downstream 3668 true Scaffold2977: 8979-12646 Arabidopsis halleri
Araha.2977s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2977: 10647-12646 Arabidopsis halleri
Araha.2977s0003 5.0kb upstream 5.0kb upstream 6668 true Scaffold2977: 3979-10646 Arabidopsis halleri
Araha.2977s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2977: 3979-8978 Arabidopsis halleri
Araha.2977s0003 5.0kb downstream 5.0kb downstream 6668 true Scaffold2977: 8979-15646 Arabidopsis halleri
Araha.2977s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2977: 10647-15646 Arabidopsis halleri
Araha.2977s0003 10.0kb upstream 10.0kb upstream 10646 true Scaffold2977: 1-10646 Arabidopsis halleri
Araha.2977s0003 10.0kb upstream 10.0kb upstream 8978 false Scaffold2977: 1-8978 Arabidopsis halleri
Araha.2977s0003 10.0kb downstream 10.0kb downstream 11668 true Scaffold2977: 8979-20646 Arabidopsis halleri
Araha.2977s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2977: 10647-20646 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360401 5261 Brassicaceae View MSA
123838201 5264 Brassicales-Malvales View MSA
124340976 5266 SBM View MSA
124250289 5268 Malvidae View MSA
124065476 5270 Rosid View MSA
123743905 5271 Pentapetalae View MSA
122791217 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain