Gene : Araha.2935s0003 A. halleri v1.1
Defline:  (1 of 3) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  3
Name:  ? Araha.2935s0003 Secondary Identifier:  ? PAC:28843788
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ASPARTATE-DEG1-PWY Arabidopsis halleri pathologic  
Ahalleri ASPARTATESYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-3001 Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  
Ahalleri THRESYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2935s0003 0.5kb upstream 0.5kb upstream 1719 true Scaffold2935: 22014-23732 Arabidopsis halleri
Araha.2935s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2935: 23233-23732 Arabidopsis halleri
Araha.2935s0003 0.5kb downstream 0.5kb downstream 1719 true Scaffold2935: 21514-23232 Arabidopsis halleri
Araha.2935s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2935: 21514-22013 Arabidopsis halleri
Araha.2935s0003 1.0kb upstream 1.0kb upstream 2219 true Scaffold2935: 22014-24232 Arabidopsis halleri
Araha.2935s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2935: 23233-24232 Arabidopsis halleri
Araha.2935s0003 1.0kb downstream 1.0kb downstream 2219 true Scaffold2935: 21014-23232 Arabidopsis halleri
Araha.2935s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2935: 21014-22013 Arabidopsis halleri
Araha.2935s0003 2.0kb upstream 2.0kb upstream 3219 true Scaffold2935: 22014-25232 Arabidopsis halleri
Araha.2935s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2935: 23233-25232 Arabidopsis halleri
Araha.2935s0003 2.0kb downstream 2.0kb downstream 3219 true Scaffold2935: 20014-23232 Arabidopsis halleri
Araha.2935s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2935: 20014-22013 Arabidopsis halleri
Araha.2935s0003 5.0kb upstream 5.0kb upstream 6219 true Scaffold2935: 22014-28232 Arabidopsis halleri
Araha.2935s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2935: 23233-28232 Arabidopsis halleri
Araha.2935s0003 5.0kb downstream 5.0kb downstream 6219 true Scaffold2935: 17014-23232 Arabidopsis halleri
Araha.2935s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2935: 17014-22013 Arabidopsis halleri
Araha.2935s0003 10.0kb upstream 10.0kb upstream 7938 true Scaffold2935: 22014-29951 Arabidopsis halleri
Araha.2935s0003 10.0kb upstream 10.0kb upstream 6719 false Scaffold2935: 23233-29951 Arabidopsis halleri
Araha.2935s0003 10.0kb downstream 10.0kb downstream 11219 true Scaffold2935: 12014-23232 Arabidopsis halleri
Araha.2935s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2935: 12014-22013 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121484375 5273 Angiosperm Singleton cluster - no MSA
122318090 5261 Brassicaceae Singleton cluster - no MSA
123759690 5264 Brassicales-Malvales Singleton cluster - no MSA
124258325 5266 SBM Singleton cluster - no MSA
124114948 5268 Malvidae Singleton cluster - no MSA
123844340 5270 Rosid Singleton cluster - no MSA
123430623 5271 Pentapetalae Singleton cluster - no MSA
122466244 5272 Eudicot Singleton cluster - no MSA
120757770 5274 Embryophyte Singleton cluster - no MSA
122800230 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain