Gene : Araha.3097s0005 A. halleri v1.1
Defline:  (1 of 1) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  5
Name:  ? Araha.3097s0005 Secondary Identifier:  ? PAC:28849946
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3097s0005 0.5kb upstream 0.5kb upstream 3249 true Scaffold3097: 16982-20230 Arabidopsis halleri
Araha.3097s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3097: 16982-17481 Arabidopsis halleri
Araha.3097s0005 0.5kb downstream 0.5kb downstream 3249 true Scaffold3097: 17482-20730 Arabidopsis halleri
Araha.3097s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3097: 20231-20730 Arabidopsis halleri
Araha.3097s0005 1.0kb upstream 1.0kb upstream 3749 true Scaffold3097: 16482-20230 Arabidopsis halleri
Araha.3097s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3097: 16482-17481 Arabidopsis halleri
Araha.3097s0005 1.0kb downstream 1.0kb downstream 3749 true Scaffold3097: 17482-21230 Arabidopsis halleri
Araha.3097s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3097: 20231-21230 Arabidopsis halleri
Araha.3097s0005 2.0kb upstream 2.0kb upstream 4749 true Scaffold3097: 15482-20230 Arabidopsis halleri
Araha.3097s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3097: 15482-17481 Arabidopsis halleri
Araha.3097s0005 2.0kb downstream 2.0kb downstream 4749 true Scaffold3097: 17482-22230 Arabidopsis halleri
Araha.3097s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3097: 20231-22230 Arabidopsis halleri
Araha.3097s0005 5.0kb upstream 5.0kb upstream 7749 true Scaffold3097: 12482-20230 Arabidopsis halleri
Araha.3097s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3097: 12482-17481 Arabidopsis halleri
Araha.3097s0005 5.0kb downstream 5.0kb downstream 7749 true Scaffold3097: 17482-25230 Arabidopsis halleri
Araha.3097s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3097: 20231-25230 Arabidopsis halleri
Araha.3097s0005 10.0kb upstream 10.0kb upstream 12749 true Scaffold3097: 7482-20230 Arabidopsis halleri
Araha.3097s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3097: 7482-17481 Arabidopsis halleri
Araha.3097s0005 10.0kb downstream 10.0kb downstream 12749 true Scaffold3097: 17482-30230 Arabidopsis halleri
Araha.3097s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3097: 20231-30230 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369807 5261 Brassicaceae View MSA
123839826 5264 Brassicales-Malvales View MSA
124338536 5266 SBM View MSA
124237828 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain