Gene : Araha.3205s0010 A. halleri v1.1

Defline:  (1 of 1) PF00612//PF01833//PF03859 - IQ calmodulin-binding motif (IQ) // IPT/TIG domain (TIG) // CG-1 domain (CG-1) Genomic Order:  10
Name:  ? Araha.3205s0010 Secondary Identifier:  ? PAC:28842563

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3205s0010 0.5kb upstream 0.5kb upstream 5842 true Scaffold3205: 40568-46409 Arabidopsis halleri
Araha.3205s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3205: 40568-41067 Arabidopsis halleri
Araha.3205s0010 0.5kb downstream 0.5kb downstream 5842 true Scaffold3205: 41068-46909 Arabidopsis halleri
Araha.3205s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3205: 46410-46909 Arabidopsis halleri
Araha.3205s0010 1.0kb upstream 1.0kb upstream 6342 true Scaffold3205: 40068-46409 Arabidopsis halleri
Araha.3205s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3205: 40068-41067 Arabidopsis halleri
Araha.3205s0010 1.0kb downstream 1.0kb downstream 6342 true Scaffold3205: 41068-47409 Arabidopsis halleri
Araha.3205s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3205: 46410-47409 Arabidopsis halleri
Araha.3205s0010 2.0kb upstream 2.0kb upstream 7342 true Scaffold3205: 39068-46409 Arabidopsis halleri
Araha.3205s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3205: 39068-41067 Arabidopsis halleri
Araha.3205s0010 2.0kb downstream 2.0kb downstream 7342 true Scaffold3205: 41068-48409 Arabidopsis halleri
Araha.3205s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3205: 46410-48409 Arabidopsis halleri
Araha.3205s0010 5.0kb upstream 5.0kb upstream 10342 true Scaffold3205: 36068-46409 Arabidopsis halleri
Araha.3205s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3205: 36068-41067 Arabidopsis halleri
Araha.3205s0010 5.0kb downstream 5.0kb downstream 10342 true Scaffold3205: 41068-51409 Arabidopsis halleri
Araha.3205s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3205: 46410-51409 Arabidopsis halleri
Araha.3205s0010 10.0kb upstream 10.0kb upstream 15342 true Scaffold3205: 31068-46409 Arabidopsis halleri
Araha.3205s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3205: 31068-41067 Arabidopsis halleri
Araha.3205s0010 10.0kb downstream 10.0kb downstream 15342 true Scaffold3205: 41068-56409 Arabidopsis halleri
Araha.3205s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3205: 46410-56409 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368170 5261 Brassicaceae View MSA
123830813 5264 Brassicales-Malvales View MSA
124346981 5266 SBM View MSA
124251869 5268 Malvidae View MSA
124071259 5270 Rosid View MSA
123742819 5271 Pentapetalae View MSA
122795418 5272 Eudicot View MSA
122048924 5273 Angiosperm View MSA
121350175 5274 Embryophyte View MSA
123427695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain