Gene : Araha.3205s0020 A. halleri v1.1
Defline:  (1 of 2) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  20
Name:  ? Araha.3205s0020 Secondary Identifier:  ? PAC:28842564
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6829 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3205s0020 0.5kb upstream 0.5kb upstream 4678 true Scaffold3205: 76463-81140 Arabidopsis halleri
Araha.3205s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3205: 80641-81140 Arabidopsis halleri
Araha.3205s0020 0.5kb downstream 0.5kb downstream 4678 true Scaffold3205: 75963-80640 Arabidopsis halleri
Araha.3205s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3205: 75963-76462 Arabidopsis halleri
Araha.3205s0020 1.0kb upstream 1.0kb upstream 5178 true Scaffold3205: 76463-81640 Arabidopsis halleri
Araha.3205s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3205: 80641-81640 Arabidopsis halleri
Araha.3205s0020 1.0kb downstream 1.0kb downstream 5178 true Scaffold3205: 75463-80640 Arabidopsis halleri
Araha.3205s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3205: 75463-76462 Arabidopsis halleri
Araha.3205s0020 2.0kb upstream 2.0kb upstream 6178 true Scaffold3205: 76463-82640 Arabidopsis halleri
Araha.3205s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3205: 80641-82640 Arabidopsis halleri
Araha.3205s0020 2.0kb downstream 2.0kb downstream 6178 true Scaffold3205: 74463-80640 Arabidopsis halleri
Araha.3205s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3205: 74463-76462 Arabidopsis halleri
Araha.3205s0020 5.0kb upstream 5.0kb upstream 9178 true Scaffold3205: 76463-85640 Arabidopsis halleri
Araha.3205s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3205: 80641-85640 Arabidopsis halleri
Araha.3205s0020 5.0kb downstream 5.0kb downstream 9178 true Scaffold3205: 71463-80640 Arabidopsis halleri
Araha.3205s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3205: 71463-76462 Arabidopsis halleri
Araha.3205s0020 10.0kb upstream 10.0kb upstream 14178 true Scaffold3205: 76463-90640 Arabidopsis halleri
Araha.3205s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3205: 80641-90640 Arabidopsis halleri
Araha.3205s0020 10.0kb downstream 10.0kb downstream 14178 true Scaffold3205: 66463-80640 Arabidopsis halleri
Araha.3205s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3205: 66463-76462 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363512 5261 Brassicaceae View MSA
123834871 5264 Brassicales-Malvales View MSA
124341938 5266 SBM View MSA
124238434 5268 Malvidae View MSA
124062723 5270 Rosid View MSA
123742505 5271 Pentapetalae View MSA
122793605 5272 Eudicot View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain