Gene : Araha.3179s0014 A. halleri v1.1
Defline:  (1 of 4) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  14
Name:  ? Araha.3179s0014 Secondary Identifier:  ? PAC:28861171
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3179s0014 0.5kb upstream 0.5kb upstream 6743 true Scaffold3179: 74663-81405 Arabidopsis halleri
Araha.3179s0014 0.5kb upstream 0.5kb upstream 78 false Scaffold3179: 81328-81405 Arabidopsis halleri
Araha.3179s0014 0.5kb downstream 0.5kb downstream 7165 true Scaffold3179: 74163-81327 Arabidopsis halleri
Araha.3179s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold3179: 74163-74662 Arabidopsis halleri
Araha.3179s0014 1.0kb upstream 1.0kb upstream 6743 true Scaffold3179: 74663-81405 Arabidopsis halleri
Araha.3179s0014 1.0kb upstream 1.0kb upstream 78 false Scaffold3179: 81328-81405 Arabidopsis halleri
Araha.3179s0014 1.0kb downstream 1.0kb downstream 7665 true Scaffold3179: 73663-81327 Arabidopsis halleri
Araha.3179s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold3179: 73663-74662 Arabidopsis halleri
Araha.3179s0014 2.0kb upstream 2.0kb upstream 6743 true Scaffold3179: 74663-81405 Arabidopsis halleri
Araha.3179s0014 2.0kb upstream 2.0kb upstream 78 false Scaffold3179: 81328-81405 Arabidopsis halleri
Araha.3179s0014 2.0kb downstream 2.0kb downstream 8665 true Scaffold3179: 72663-81327 Arabidopsis halleri
Araha.3179s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold3179: 72663-74662 Arabidopsis halleri
Araha.3179s0014 5.0kb upstream 5.0kb upstream 6743 true Scaffold3179: 74663-81405 Arabidopsis halleri
Araha.3179s0014 5.0kb upstream 5.0kb upstream 78 false Scaffold3179: 81328-81405 Arabidopsis halleri
Araha.3179s0014 5.0kb downstream 5.0kb downstream 11665 true Scaffold3179: 69663-81327 Arabidopsis halleri
Araha.3179s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold3179: 69663-74662 Arabidopsis halleri
Araha.3179s0014 10.0kb upstream 10.0kb upstream 6743 true Scaffold3179: 74663-81405 Arabidopsis halleri
Araha.3179s0014 10.0kb upstream 10.0kb upstream 78 false Scaffold3179: 81328-81405 Arabidopsis halleri
Araha.3179s0014 10.0kb downstream 10.0kb downstream 16665 true Scaffold3179: 64663-81327 Arabidopsis halleri
Araha.3179s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold3179: 64663-74662 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122327817 5261 Brassicaceae View MSA
123769216 5264 Brassicales-Malvales View MSA
124267787 5266 SBM View MSA
124124074 5268 Malvidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain