Gene : Araha.3134s0001 A. halleri v1.1
Defline:  (1 of 3) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  1
Name:  ? Araha.3134s0001 Secondary Identifier:  ? PAC:28861814
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-3461 Arabidopsis halleri pathologic  
Ahalleri PWY-3462 Arabidopsis halleri pathologic  
Ahalleri PWY-3481 Arabidopsis halleri pathologic  

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3134s0001 0.5kb upstream 0.5kb upstream 1536 true Scaffold3134: 1-1536 Arabidopsis halleri
Araha.3134s0001 0.5kb upstream 0.5kb upstream 10 false Scaffold3134: 1-10 Arabidopsis halleri
Araha.3134s0001 0.5kb downstream 0.5kb downstream 2026 true Scaffold3134: 11-2036 Arabidopsis halleri
Araha.3134s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3134: 1537-2036 Arabidopsis halleri
Araha.3134s0001 1.0kb upstream 1.0kb upstream 1536 true Scaffold3134: 1-1536 Arabidopsis halleri
Araha.3134s0001 1.0kb upstream 1.0kb upstream 10 false Scaffold3134: 1-10 Arabidopsis halleri
Araha.3134s0001 1.0kb downstream 1.0kb downstream 2526 true Scaffold3134: 11-2536 Arabidopsis halleri
Araha.3134s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3134: 1537-2536 Arabidopsis halleri
Araha.3134s0001 2.0kb upstream 2.0kb upstream 1536 true Scaffold3134: 1-1536 Arabidopsis halleri
Araha.3134s0001 2.0kb upstream 2.0kb upstream 10 false Scaffold3134: 1-10 Arabidopsis halleri
Araha.3134s0001 2.0kb downstream 2.0kb downstream 3526 true Scaffold3134: 11-3536 Arabidopsis halleri
Araha.3134s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3134: 1537-3536 Arabidopsis halleri
Araha.3134s0001 5.0kb upstream 5.0kb upstream 1536 true Scaffold3134: 1-1536 Arabidopsis halleri
Araha.3134s0001 5.0kb upstream 5.0kb upstream 10 false Scaffold3134: 1-10 Arabidopsis halleri
Araha.3134s0001 5.0kb downstream 5.0kb downstream 6526 true Scaffold3134: 11-6536 Arabidopsis halleri
Araha.3134s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3134: 1537-6536 Arabidopsis halleri
Araha.3134s0001 10.0kb upstream 10.0kb upstream 1536 true Scaffold3134: 1-1536 Arabidopsis halleri
Araha.3134s0001 10.0kb upstream 10.0kb upstream 10 false Scaffold3134: 1-10 Arabidopsis halleri
Araha.3134s0001 10.0kb downstream 10.0kb downstream 11526 true Scaffold3134: 11-11536 Arabidopsis halleri
Araha.3134s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3134: 1537-11536 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122377151 5261 Brassicaceae View MSA
123835152 5264 Brassicales-Malvales View MSA
124322009 5266 SBM View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain