Gene : Araha.3362s0021 A. halleri v1.1

Defline:  (1 of 15) 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase Genomic Order:  21
Name:  ? Araha.3362s0021 Secondary Identifier:  ? PAC:28846184

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6902 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3362s0021 0.5kb upstream 0.5kb upstream 1836 true Scaffold3362: 65883-67718 Arabidopsis halleri
Araha.3362s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3362: 65883-66382 Arabidopsis halleri
Araha.3362s0021 0.5kb downstream 0.5kb downstream 1836 true Scaffold3362: 66383-68218 Arabidopsis halleri
Araha.3362s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3362: 67719-68218 Arabidopsis halleri
Araha.3362s0021 1.0kb upstream 1.0kb upstream 2336 true Scaffold3362: 65383-67718 Arabidopsis halleri
Araha.3362s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3362: 65383-66382 Arabidopsis halleri
Araha.3362s0021 1.0kb downstream 1.0kb downstream 2336 true Scaffold3362: 66383-68718 Arabidopsis halleri
Araha.3362s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold3362: 67719-68718 Arabidopsis halleri
Araha.3362s0021 2.0kb upstream 2.0kb upstream 3336 true Scaffold3362: 64383-67718 Arabidopsis halleri
Araha.3362s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3362: 64383-66382 Arabidopsis halleri
Araha.3362s0021 2.0kb downstream 2.0kb downstream 3336 true Scaffold3362: 66383-69718 Arabidopsis halleri
Araha.3362s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold3362: 67719-69718 Arabidopsis halleri
Araha.3362s0021 5.0kb upstream 5.0kb upstream 6336 true Scaffold3362: 61383-67718 Arabidopsis halleri
Araha.3362s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3362: 61383-66382 Arabidopsis halleri
Araha.3362s0021 5.0kb downstream 5.0kb downstream 6336 true Scaffold3362: 66383-72718 Arabidopsis halleri
Araha.3362s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold3362: 67719-72718 Arabidopsis halleri
Araha.3362s0021 10.0kb upstream 10.0kb upstream 11336 true Scaffold3362: 56383-67718 Arabidopsis halleri
Araha.3362s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3362: 56383-66382 Arabidopsis halleri
Araha.3362s0021 10.0kb downstream 10.0kb downstream 11336 true Scaffold3362: 66383-77718 Arabidopsis halleri
Araha.3362s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold3362: 67719-77718 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122370727 5261 Brassicaceae View MSA
123800030 5264 Brassicales-Malvales View MSA
124297491 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain