Gene : Araha.3365s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR23222:SF1 - PROHIBITIN-2 Genomic Order:  5
Name:  ? Araha.3365s0005 Secondary Identifier:  ? PAC:28852559

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3365s0005 0.5kb upstream 0.5kb upstream 2680 true Scaffold3365: 13651-16330 Arabidopsis halleri
Araha.3365s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3365: 15831-16330 Arabidopsis halleri
Araha.3365s0005 0.5kb downstream 0.5kb downstream 2680 true Scaffold3365: 13151-15830 Arabidopsis halleri
Araha.3365s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3365: 13151-13650 Arabidopsis halleri
Araha.3365s0005 1.0kb upstream 1.0kb upstream 3180 true Scaffold3365: 13651-16830 Arabidopsis halleri
Araha.3365s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3365: 15831-16830 Arabidopsis halleri
Araha.3365s0005 1.0kb downstream 1.0kb downstream 3180 true Scaffold3365: 12651-15830 Arabidopsis halleri
Araha.3365s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3365: 12651-13650 Arabidopsis halleri
Araha.3365s0005 2.0kb upstream 2.0kb upstream 4180 true Scaffold3365: 13651-17830 Arabidopsis halleri
Araha.3365s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3365: 15831-17830 Arabidopsis halleri
Araha.3365s0005 2.0kb downstream 2.0kb downstream 4180 true Scaffold3365: 11651-15830 Arabidopsis halleri
Araha.3365s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3365: 11651-13650 Arabidopsis halleri
Araha.3365s0005 5.0kb upstream 5.0kb upstream 7180 true Scaffold3365: 13651-20830 Arabidopsis halleri
Araha.3365s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3365: 15831-20830 Arabidopsis halleri
Araha.3365s0005 5.0kb downstream 5.0kb downstream 7180 true Scaffold3365: 8651-15830 Arabidopsis halleri
Araha.3365s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3365: 8651-13650 Arabidopsis halleri
Araha.3365s0005 10.0kb upstream 10.0kb upstream 12180 true Scaffold3365: 13651-25830 Arabidopsis halleri
Araha.3365s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3365: 15831-25830 Arabidopsis halleri
Araha.3365s0005 10.0kb downstream 10.0kb downstream 12180 true Scaffold3365: 3651-15830 Arabidopsis halleri
Araha.3365s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3365: 3651-13650 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365371 5261 Brassicaceae View MSA
123831616 5264 Brassicales-Malvales View MSA
124340222 5266 SBM View MSA
124243726 5268 Malvidae View MSA
124065127 5270 Rosid View MSA
123749728 5271 Pentapetalae View MSA
122788534 5272 Eudicot View MSA
122042382 5273 Angiosperm View MSA
121346311 5274 Embryophyte View MSA
123424137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain