Gene : Araha.3273s0001 A. halleri v1.1

Defline:  (1 of 1) KOG2216 - Conserved coiled/coiled coil protein Genomic Order:  1
Name:  ? Araha.3273s0001 Secondary Identifier:  ? PAC:28850983

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3273s0001 0.5kb upstream 0.5kb upstream 1980 true Scaffold3273: 1-1980 Arabidopsis halleri
Araha.3273s0001 0.5kb upstream 0.5kb upstream 438 false Scaffold3273: 1-438 Arabidopsis halleri
Araha.3273s0001 0.5kb downstream 0.5kb downstream 2042 true Scaffold3273: 439-2480 Arabidopsis halleri
Araha.3273s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3273: 1981-2480 Arabidopsis halleri
Araha.3273s0001 1.0kb upstream 1.0kb upstream 1980 true Scaffold3273: 1-1980 Arabidopsis halleri
Araha.3273s0001 1.0kb upstream 1.0kb upstream 438 false Scaffold3273: 1-438 Arabidopsis halleri
Araha.3273s0001 1.0kb downstream 1.0kb downstream 2542 true Scaffold3273: 439-2980 Arabidopsis halleri
Araha.3273s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3273: 1981-2980 Arabidopsis halleri
Araha.3273s0001 2.0kb upstream 2.0kb upstream 1980 true Scaffold3273: 1-1980 Arabidopsis halleri
Araha.3273s0001 2.0kb upstream 2.0kb upstream 438 false Scaffold3273: 1-438 Arabidopsis halleri
Araha.3273s0001 2.0kb downstream 2.0kb downstream 3542 true Scaffold3273: 439-3980 Arabidopsis halleri
Araha.3273s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3273: 1981-3980 Arabidopsis halleri
Araha.3273s0001 5.0kb upstream 5.0kb upstream 1980 true Scaffold3273: 1-1980 Arabidopsis halleri
Araha.3273s0001 5.0kb upstream 5.0kb upstream 438 false Scaffold3273: 1-438 Arabidopsis halleri
Araha.3273s0001 5.0kb downstream 5.0kb downstream 5601 true Scaffold3273: 439-6039 Arabidopsis halleri
Araha.3273s0001 5.0kb downstream 5.0kb downstream 4059 false Scaffold3273: 1981-6039 Arabidopsis halleri
Araha.3273s0001 10.0kb upstream 10.0kb upstream 1980 true Scaffold3273: 1-1980 Arabidopsis halleri
Araha.3273s0001 10.0kb upstream 10.0kb upstream 438 false Scaffold3273: 1-438 Arabidopsis halleri
Araha.3273s0001 10.0kb downstream 10.0kb downstream 5601 true Scaffold3273: 439-6039 Arabidopsis halleri
Araha.3273s0001 10.0kb downstream 10.0kb downstream 4059 false Scaffold3273: 1981-6039 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026540 5273 Angiosperm View MSA
122360837 5261 Brassicaceae View MSA
123798041 5264 Brassicales-Malvales View MSA
124295723 5266 SBM View MSA
124148083 5268 Malvidae View MSA
124037327 5270 Rosid View MSA
123610279 5271 Pentapetalae View MSA
122644905 5272 Eudicot View MSA
121296375 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain