Gene : Araha.3365s0027 A. halleri v1.1
Defline:  (1 of 3) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  27
Name:  ? Araha.3365s0027 Secondary Identifier:  ? PAC:28852569
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWYDQC-4 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3365s0027 0.5kb upstream 0.5kb upstream 2179 true Scaffold3365: 137687-139865 Arabidopsis halleri
Araha.3365s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold3365: 137687-138186 Arabidopsis halleri
Araha.3365s0027 0.5kb downstream 0.5kb downstream 2179 true Scaffold3365: 138187-140365 Arabidopsis halleri
Araha.3365s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold3365: 139866-140365 Arabidopsis halleri
Araha.3365s0027 1.0kb upstream 1.0kb upstream 2679 true Scaffold3365: 137187-139865 Arabidopsis halleri
Araha.3365s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold3365: 137187-138186 Arabidopsis halleri
Araha.3365s0027 1.0kb downstream 1.0kb downstream 2679 true Scaffold3365: 138187-140865 Arabidopsis halleri
Araha.3365s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold3365: 139866-140865 Arabidopsis halleri
Araha.3365s0027 2.0kb upstream 2.0kb upstream 3679 true Scaffold3365: 136187-139865 Arabidopsis halleri
Araha.3365s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold3365: 136187-138186 Arabidopsis halleri
Araha.3365s0027 2.0kb downstream 2.0kb downstream 3117 true Scaffold3365: 138187-141303 Arabidopsis halleri
Araha.3365s0027 2.0kb downstream 2.0kb downstream 1438 false Scaffold3365: 139866-141303 Arabidopsis halleri
Araha.3365s0027 5.0kb upstream 5.0kb upstream 6679 true Scaffold3365: 133187-139865 Arabidopsis halleri
Araha.3365s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold3365: 133187-138186 Arabidopsis halleri
Araha.3365s0027 5.0kb downstream 5.0kb downstream 3117 true Scaffold3365: 138187-141303 Arabidopsis halleri
Araha.3365s0027 5.0kb downstream 5.0kb downstream 1438 false Scaffold3365: 139866-141303 Arabidopsis halleri
Araha.3365s0027 10.0kb upstream 10.0kb upstream 11679 true Scaffold3365: 128187-139865 Arabidopsis halleri
Araha.3365s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold3365: 128187-138186 Arabidopsis halleri
Araha.3365s0027 10.0kb downstream 10.0kb downstream 3117 true Scaffold3365: 138187-141303 Arabidopsis halleri
Araha.3365s0027 10.0kb downstream 10.0kb downstream 1438 false Scaffold3365: 139866-141303 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363996 5261 Brassicaceae View MSA
123831660 5264 Brassicales-Malvales View MSA
124346483 5266 SBM View MSA
124244542 5268 Malvidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain