Gene : Araha.3712s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.3712s0001 Secondary Identifier:  ? PAC:28857659
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5409 Arabidopsis halleri pathologic  
Ahalleri PWY-5410 Arabidopsis halleri pathologic  
Ahalleri PWY-735 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3712s0001 0.5kb upstream 0.5kb upstream 4888 true Scaffold3712: 5731-10618 Arabidopsis halleri
Araha.3712s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3712: 5731-6230 Arabidopsis halleri
Araha.3712s0001 0.5kb downstream 0.5kb downstream 4888 true Scaffold3712: 6231-11118 Arabidopsis halleri
Araha.3712s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3712: 10619-11118 Arabidopsis halleri
Araha.3712s0001 1.0kb upstream 1.0kb upstream 5388 true Scaffold3712: 5231-10618 Arabidopsis halleri
Araha.3712s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3712: 5231-6230 Arabidopsis halleri
Araha.3712s0001 1.0kb downstream 1.0kb downstream 5388 true Scaffold3712: 6231-11618 Arabidopsis halleri
Araha.3712s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3712: 10619-11618 Arabidopsis halleri
Araha.3712s0001 2.0kb upstream 2.0kb upstream 6388 true Scaffold3712: 4231-10618 Arabidopsis halleri
Araha.3712s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3712: 4231-6230 Arabidopsis halleri
Araha.3712s0001 2.0kb downstream 2.0kb downstream 6388 true Scaffold3712: 6231-12618 Arabidopsis halleri
Araha.3712s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3712: 10619-12618 Arabidopsis halleri
Araha.3712s0001 5.0kb upstream 5.0kb upstream 9388 true Scaffold3712: 1231-10618 Arabidopsis halleri
Araha.3712s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3712: 1231-6230 Arabidopsis halleri
Araha.3712s0001 5.0kb downstream 5.0kb downstream 9388 true Scaffold3712: 6231-15618 Arabidopsis halleri
Araha.3712s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3712: 10619-15618 Arabidopsis halleri
Araha.3712s0001 10.0kb upstream 10.0kb upstream 10618 true Scaffold3712: 1-10618 Arabidopsis halleri
Araha.3712s0001 10.0kb upstream 10.0kb upstream 6230 false Scaffold3712: 1-6230 Arabidopsis halleri
Araha.3712s0001 10.0kb downstream 10.0kb downstream 14388 true Scaffold3712: 6231-20618 Arabidopsis halleri
Araha.3712s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3712: 10619-20618 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365902 5261 Brassicaceae View MSA
123839661 5264 Brassicales-Malvales View MSA
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain