Gene : Araha.3696s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR18901:SF38 - PSEUDOURIDINE-5'-MONOPHOSPHATASE Genomic Order:  3
Name:  ? Araha.3696s0003 Secondary Identifier:  ? PAC:28847153

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3696s0003 0.5kb upstream 0.5kb upstream 2538 true Scaffold3696: 3780-6317 Arabidopsis halleri
Araha.3696s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3696: 3780-4279 Arabidopsis halleri
Araha.3696s0003 0.5kb downstream 0.5kb downstream 2538 true Scaffold3696: 4280-6817 Arabidopsis halleri
Araha.3696s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3696: 6318-6817 Arabidopsis halleri
Araha.3696s0003 1.0kb upstream 1.0kb upstream 3038 true Scaffold3696: 3280-6317 Arabidopsis halleri
Araha.3696s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3696: 3280-4279 Arabidopsis halleri
Araha.3696s0003 1.0kb downstream 1.0kb downstream 3038 true Scaffold3696: 4280-7317 Arabidopsis halleri
Araha.3696s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3696: 6318-7317 Arabidopsis halleri
Araha.3696s0003 2.0kb upstream 2.0kb upstream 4038 true Scaffold3696: 2280-6317 Arabidopsis halleri
Araha.3696s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3696: 2280-4279 Arabidopsis halleri
Araha.3696s0003 2.0kb downstream 2.0kb downstream 4038 true Scaffold3696: 4280-8317 Arabidopsis halleri
Araha.3696s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3696: 6318-8317 Arabidopsis halleri
Araha.3696s0003 5.0kb upstream 5.0kb upstream 6317 true Scaffold3696: 1-6317 Arabidopsis halleri
Araha.3696s0003 5.0kb upstream 5.0kb upstream 4279 false Scaffold3696: 1-4279 Arabidopsis halleri
Araha.3696s0003 5.0kb downstream 5.0kb downstream 7038 true Scaffold3696: 4280-11317 Arabidopsis halleri
Araha.3696s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3696: 6318-11317 Arabidopsis halleri
Araha.3696s0003 10.0kb upstream 10.0kb upstream 6317 true Scaffold3696: 1-6317 Arabidopsis halleri
Araha.3696s0003 10.0kb upstream 10.0kb upstream 4279 false Scaffold3696: 1-4279 Arabidopsis halleri
Araha.3696s0003 10.0kb downstream 10.0kb downstream 12038 true Scaffold3696: 4280-16317 Arabidopsis halleri
Araha.3696s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3696: 6318-16317 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375127 5261 Brassicaceae View MSA
123830633 5264 Brassicales-Malvales View MSA
124349958 5266 SBM View MSA
124240104 5268 Malvidae View MSA
124062369 5270 Rosid View MSA
123753375 5271 Pentapetalae View MSA
122795985 5272 Eudicot View MSA
122043634 5273 Angiosperm View MSA
121345579 5274 Embryophyte View MSA
123427894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain