Gene : Araha.3669s0001 A. halleri v1.1
Defline:  (1 of 2) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  1
Name:  ? Araha.3669s0001 Secondary Identifier:  ? PAC:28863256
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3669s0001 0.5kb upstream 0.5kb upstream 1465 true Scaffold3669: 1-1465 Arabidopsis halleri
Araha.3669s0001 0.5kb upstream 0.5kb upstream 281 false Scaffold3669: 1-281 Arabidopsis halleri
Araha.3669s0001 0.5kb downstream 0.5kb downstream 1684 true Scaffold3669: 282-1965 Arabidopsis halleri
Araha.3669s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3669: 1466-1965 Arabidopsis halleri
Araha.3669s0001 1.0kb upstream 1.0kb upstream 1465 true Scaffold3669: 1-1465 Arabidopsis halleri
Araha.3669s0001 1.0kb upstream 1.0kb upstream 281 false Scaffold3669: 1-281 Arabidopsis halleri
Araha.3669s0001 1.0kb downstream 1.0kb downstream 2184 true Scaffold3669: 282-2465 Arabidopsis halleri
Araha.3669s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3669: 1466-2465 Arabidopsis halleri
Araha.3669s0001 2.0kb upstream 2.0kb upstream 1465 true Scaffold3669: 1-1465 Arabidopsis halleri
Araha.3669s0001 2.0kb upstream 2.0kb upstream 281 false Scaffold3669: 1-281 Arabidopsis halleri
Araha.3669s0001 2.0kb downstream 2.0kb downstream 3184 true Scaffold3669: 282-3465 Arabidopsis halleri
Araha.3669s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3669: 1466-3465 Arabidopsis halleri
Araha.3669s0001 5.0kb upstream 5.0kb upstream 1465 true Scaffold3669: 1-1465 Arabidopsis halleri
Araha.3669s0001 5.0kb upstream 5.0kb upstream 281 false Scaffold3669: 1-281 Arabidopsis halleri
Araha.3669s0001 5.0kb downstream 5.0kb downstream 6184 true Scaffold3669: 282-6465 Arabidopsis halleri
Araha.3669s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3669: 1466-6465 Arabidopsis halleri
Araha.3669s0001 10.0kb upstream 10.0kb upstream 1465 true Scaffold3669: 1-1465 Arabidopsis halleri
Araha.3669s0001 10.0kb upstream 10.0kb upstream 281 false Scaffold3669: 1-281 Arabidopsis halleri
Araha.3669s0001 10.0kb downstream 10.0kb downstream 11184 true Scaffold3669: 282-11465 Arabidopsis halleri
Araha.3669s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3669: 1466-11465 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381402 5261 Brassicaceae View MSA
123840325 5264 Brassicales-Malvales View MSA
124349006 5266 SBM View MSA
124249733 5268 Malvidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain